Gene Information

Name : TherJR_1549 (TherJR_1549)
Accession : YP_003640303.1
Strain : Thermincola potens JR
Genome accession: NC_014152
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerC
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 1613321 - 1614229 bp
Length : 909 bp
Strand : -
Note : KEGG: pth:PTH_1248 site-specific recombinase XerD; TIGRFAM: tyrosine recombinase XerC; tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein

DNA sequence : 
ATGTACAATTATGTTGATGATTTTATGGTCTATTTACAGGTCGAAAAAAATGCTTCCGAAAAAACACTGCAGAGCTATCA
GACTGACTTATTCCAGATGGTGGACTTTATAAGTGCTGAAATTAATATAACTCCGGAAAATCTGCAACCGGACCGGGTTG
ACCACCTGGTAATCAGAAAATTCCTGGCTGAACTACAGAGAAGAGGACTGTCCAGAAGTACCATAGCTCGAAAACTGGCA
GCCATGCGGACTTTTTTCAGGTTTTTATGCCGGGAAGAAGTAATTACGCGGAACCCGTTGATTGAAGTTGCTACACCGAA
AGTGGAAAAACGACTGCCGCAATTTTTATACCAGGACGACATAAGAAACCTGATTGAAGCGCCGGAGAGAAACACTCCCA
GGGGATTGCGAGACAGGGCCATTCTGGAAACCCTTTACGCATCCGGAATCAGGGTCAGTGAACTGGTTAATCTGGATATG
ACCGATATCGACCTGAACACAGGTTATGTGCGTGTAATGGGCAAAGGCGCCAAAGAACGAGTTGTTCCACTGGGTCAGTT
TGCCATAAACGCCTTGAAAGCCTATCTTACTCACGGCAGAACCAGGCTGGCCTGCAGGTCAAAAGAACCTTCGGAGGCTG
TTTTCCTGAACAAAGCGGGACAACGTATTTCCGTACGCAGTATTCGCGATATCGTTAATAAATACGTGCGTAAAATCAGC
ATCAGGCAGAGGGTAAGCCCCCATATTATCCGTCATTCCTTTGCCACCCATTTATTGGATGCTGGGGCAGACCTTAGAAC
AGTACAGGAATTATTGGGGCACGTTAAAATGTCTACGACACAAATTTATACCCATGTAACCAGAGAACATTTAAAAGAAG
TTTACAAGAAAGCACATCCGCGGGCTTGA

Protein sequence : 
MYNYVDDFMVYLQVEKNASEKTLQSYQTDLFQMVDFISAEINITPENLQPDRVDHLVIRKFLAELQRRGLSRSTIARKLA
AMRTFFRFLCREEVITRNPLIEVATPKVEKRLPQFLYQDDIRNLIEAPERNTPRGLRDRAILETLYASGIRVSELVNLDM
TDIDLNTGYVRVMGKGAKERVVPLGQFAINALKAYLTHGRTRLACRSKEPSEAVFLNKAGQRISVRSIRDIVNKYVRKIS
IRQRVSPHIIRHSFATHLLDAGADLRTVQELLGHVKMSTTQIYTHVTREHLKEVYKKAHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 6e-51 41
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 6e-51 41