Gene Information

Name : TherJR_1299 (TherJR_1299)
Accession : YP_003640060.1
Strain : Thermincola potens JR
Genome accession: NC_014152
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1371122 - 1371790 bp
Length : 669 bp
Strand : -
Note : KEGG: mbu:Mbur_0081 ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: ATPase AAA

DNA sequence : 
ATGGGCATTGCAATAGAATCGCTCCATAAAAGTTACAAAAATGGCGATGAAATTACCGAAGTTTTAAAAAATGTCAACTT
AACCGTAAATGACGGCGAATTCGTGGCTATTATCGGCCCTTCCGGTTCGGGAAAAACGACTTTAATGAATATTATTGGCT
GCCTGGACCGGCCCACCAGGGGAAAATACCTGTTGGCCGGACAGGATACCGGCAAACTGAATGACAGAATGCTGGCCAAA
ATAAGAAACAAGCATATTGGATTTGTCTTCCAGTCCTTTAATCTGCTACCCCAATACACTGCCCTGGAAAATGTTGAACT
GGCCGGTCTTTACGGCAATGAACCGCCGAGAAAAGTAAAGGAAAAGGCAAAAGAAGCCTTGTCTGCCCTGGGATTAGAAA
ACAGGTTGAAGTATAAACCGAACCAGTTGTCCGGTGGCCAAAAACAGCGGGTAGCTATTGCGCGGGCTATCATAAATTCG
CCTTCTGTCATTTTAGCAGATGAACCCACGGGCAGCCTGGACTCGAAAACCGGTCGCGAAGTTCTGGATATTTTTAAGGA
TTTAAACAGGAAAGGAAAAACAGTAATTATAGTTACCCATGACTTAAATATTGCCAGGGAAGCCAACCGGATTTTAAACA
TAAAAGACGGCATTGTGGAGGAAGCCTAA

Protein sequence : 
MGIAIESLHKSYKNGDEITEVLKNVNLTVNDGEFVAIIGPSGSGKTTLMNIIGCLDRPTRGKYLLAGQDTGKLNDRMLAK
IRNKHIGFVFQSFNLLPQYTALENVELAGLYGNEPPRKVKEKAKEALSALGLENRLKYKPNQLSGGQKQRVAIARAIINS
PSVILADEPTGSLDSKTGREVLDIFKDLNRKGKTVIIVTHDLNIAREANRILNIKDGIVEEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 8e-36 45
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-34 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-35 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-35 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-35 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TherJR_1299 YP_003640060.1 ABC transporter NC_012469.1.7686878. Protein 1e-54 55
TherJR_1299 YP_003640060.1 ABC transporter CP001581.1.gene798.p Protein 2e-41 45
TherJR_1299 YP_003640060.1 ABC transporter NC_008702.1.4606598. Protein 9e-42 45
TherJR_1299 YP_003640060.1 ABC transporter CP001581.1.gene598.p Protein 1e-36 42
TherJR_1299 YP_003640060.1 ABC transporter NC_012469.1.7686946. Protein 2e-28 42