Gene Information

Name : TherJR_1097 (TherJR_1097)
Accession : YP_003639862.1
Strain : Thermincola potens JR
Genome accession: NC_014152
Putative virulence/resistance : Resistance
Product : binding-protein-dependent transport system inner membrane protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1173
EC number : -
Position : 1150610 - 1151446 bp
Length : 837 bp
Strand : +
Note : PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tro:trd_A0701 oligopeptide ABC transporter permease protein

DNA sequence : 
GTGCAGAATGAAGTTTTAAAACGGCTTCTTAAAGATAAAGCGGCCATTGTAGGCGCCCTGGTTTTAGTTACAATACTGGT
ACTCAGTTTGCTTGCCCCGCTGATTGCTCCCTATGACCCTAATGCCATCGATACCTTTAACCGTTTGAAGCCTATTGGTA
CACCGGGTCACATTCTTGGCACCGATGAGTTGGGCCGGGATATATTGTCCAGATTGTTATGGGGGGGCCGAATTTCTGTA
GCGGTTGGCTTTTTTGCCGTTGCCTTTGCCATGTTTTGGGGCGTCCTAATAGGTCTGCTGGCCGGATATTACAAAGGTTT
TTTTGACACATTGGCCATGCGGTTTATGGACATTTTGCTGGCTTTTCCTTATGTACTCCTGGCCATTGCCATCATTGCGG
CCCTGGGCCCCGGACTTGTTAACGCCATGCTGGCCATTGCCATTGTTGGTATACCCTATTACGCCAGGATAATCCGCGGG
ACGGTGTTGTCCCTGAAGGAAAAAGAATTCATCGAAGCTTTGCGGGCGTTGGGAGCCAGCGATTTCAGAATAATGTTCAA
ACACATTCTTCCCAATAGTTTAGGCCCTCTGGTTGTTGCGGCAACCCTGGATGTAGGCTGGATGATTGTGGCAGCGTCAG
GGATGAGCTTTTTAGGATTAGGCGCACAGCCGCCTACATCTGAATGGGGGCTGATGCTGAGCCTTGGCAGGAAATATATC
AGGGTGGCGCCTCATCTTTCACTGTTGCCTGGTTTAATGATTTTTCTGGTTGTTTTATCTTTAAACTTGCTCGGCGATGG
GTTGCGAGATGCACTGGACCCCAAACTTAGAGATTAA

Protein sequence : 
MQNEVLKRLLKDKAAIVGALVLVTILVLSLLAPLIAPYDPNAIDTFNRLKPIGTPGHILGTDELGRDILSRLLWGGRISV
AVGFFAVAFAMFWGVLIGLLAGYYKGFFDTLAMRFMDILLAFPYVLLAIAIIAALGPGLVNAMLAIAIVGIPYYARIIRG
TVLSLKEKEFIEALRALGASDFRIMFKHILPNSLGPLVVAATLDVGWMIVAASGMSFLGLGAQPPTSEWGLMLSLGRKYI
RVAPHLSLLPGLMIFLVVLSLNLLGDGLRDALDPKLRD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppC YP_005160016.1 putative peptide transport system membrane protein Not tested Not named Protein 6e-25 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TherJR_1097 YP_003639862.1 binding-protein-dependent transport system inner membrane protein BAC0272 Protein 4e-32 43