|
Name : Plim_0837 (Plim_0837) Accession : YP_003628881.1 Strain : Planctomyces limnophilus DSM 3776 Genome accession: NC_014148 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 1073576 - 1075039 bp Length : 1464 bp Strand : + Note : TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: bsu:BSU00820 lysyl-tRNA synthetase DNA sequence : ATGTCAGACACTCCTGAGCATCTGCTGGCCGCCCGTCTTGAAAAGCTTGAGCGAATGGAAGCCCTGGGGCATGATCCCTG GGGGCAGCGTTTCGATGGACACATGCACATTGATGCCGCCCGGGCCAAGGCACCGGAAGAAAAGGGAATCGATGGCGAAG TGGTGCGTGTGGCCGGTCGCGTCATGCGCTGGAGTGATTCGGGCAAGCTGCGGTTTGGGACAATTCAGGATTACACCGGT CGTATTCAGGTGATGATCTCGAAGAAGGACATTGCCGAAGACCAGTGGGAACTGATGGAATGCTTCCAGACGGGCGACCT GCTGGGGGTGGATGGAACGTTACGCCGCACCAATACGGGCGAAATTTCTGTTTTTGCCACGAAGCTGCATGTGTTAGGTA AGAGTCTTTCACAGCCGCCGGAAAAGTGGCATGGCCTGCAGGATATCGAGACACTCCTTCGCCAGCGTTATCTCGACCTG ATCTATAACGATGGTGTTCTCGCCCGTATGTTGCGGCGATTGAAGATCATCGATTCGATCCGTCAAACGCTGCGAGGGGA AGAGTTTTTCGAAGTTGAAACGCCTGTTCTGCATGCGATTGCCGGGGGGGCTGCAGCACGGCCATTTATTACGCATCATA ATGCGCTCGACATACCGCTTTATCTGCGGATTGCCCTCGAGTTGCATCTCAAGCGACTGATGGTGGGCGGGATTGAGCGG GTTTATGAAATTGGCCGCGTCTTCCGTAATGAAGGTGTTGACGCCACGCATAACCCGGAATTCACCATGATCGAGCTGTA TCAGGCTTATGCCGATTACAACATCATGATGGAACTGGCTGAGAAGATTATTTCCGAAGCCTGCAAGGCTGCCAATGATG GCAAGACGGTTGTCGAGTGGGGAGACAAGACGCTCGACTTCACACCACCATTCCAGCGGGCCAAGTATGGTGATCTGTTC CTGAAGCATGCTGGCTGCGACATGCACGATGCGGCGGCAGTGGCTGAAGTTGCCCGCAAGCTGCACATTCCTACCGAGGG GCGGCATCATGATGTGATTGTTAACGATGTCTTTGAAGCGACCGTGGAAGATCATCTCGAAGGCCCGGTGTTTGTGATTG ATTACCCATCGAGTATGTGCCCGCTGACTAAGCGAAAGAACGGCCAGCCCGAGATTGCCGAACGATTTGAACTCTTTATT CATGGTCTCGAACTGGCCAATGCCTATACCGAATTGAACGATCCCAGGTTGCAGGAAGATCTGTTCAAGACACAGCTGGC AGGTCTGGCAGAAGAAGACTCGATGGCGAAGATGGATCATGACTTCGTGCGTGCTCTCAAGGTTGGTATGCCTTGTGCGG GTGGTATGGGGATCGGTATTGACCGGCTCGTCATGCTCCTGACCAACACTAAGACCATTCGTGATGTGATCTTCTTCCCG CTGCTGAAGCCCGAAGTCGAGTAG Protein sequence : MSDTPEHLLAARLEKLERMEALGHDPWGQRFDGHMHIDAARAKAPEEKGIDGEVVRVAGRVMRWSDSGKLRFGTIQDYTG RIQVMISKKDIAEDQWELMECFQTGDLLGVDGTLRRTNTGEISVFATKLHVLGKSLSQPPEKWHGLQDIETLLRQRYLDL IYNDGVLARMLRRLKIIDSIRQTLRGEEFFEVETPVLHAIAGGAAARPFITHHNALDIPLYLRIALELHLKRLMVGGIER VYEIGRVFRNEGVDATHNPEFTMIELYQAYADYNIMMELAEKIISEACKAANDGKTVVEWGDKTLDFTPPFQRAKYGDLF LKHAGCDMHDAAAVAEVARKLHIPTEGRHHDVIVNDVFEATVEDHLEGPVFVIDYPSSMCPLTKRKNGQPEIAERFELFI HGLELANAYTELNDPRLQEDLFKTQLAGLAEEDSMAKMDHDFVRALKVGMPCAGGMGIGIDRLVMLLTNTKTIRDVIFFP LLKPEVE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 3e-79 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Plim_0837 | YP_003628881.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 1e-79 | 43 |
