Gene Information

Name : Plim_0683 (Plim_0683)
Accession : YP_003628729.1
Strain : Planctomyces limnophilus DSM 3776
Genome accession: NC_014148
Putative virulence/resistance : Virulence
Product : glutamine synthetase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : -
Position : 895294 - 896715 bp
Length : 1422 bp
Strand : +
Note : TIGRFAM: glutamine synthetase; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: afw:Anae109_4400 glutamine synthetase

DNA sequence :
GTGACTGATATGACACCCCGTGAAGTTCTCGCGCTCTGCCGGGAACGTGAGATCTACGCCGTCGATCTGCGATTCATGGA
TTTTCCGGGGCTGCAAAAGCACTTTACCATCCCCGTTTCCGAACTGACGGAGCAGAGCTTTGACGAAGGCTTTGGCTTTG
ATGGTTCCTCGATTCGCGGATGGCAGGCCATTAACGAGAGCGACATGCTGGTCGTTCCCGAGGCTTCCACCGCGATTGTC
GATCCGTTTATGACACGCACGCTCGCCATGACGTGCAACATTCAGGATCCCATCACTCGGGAAGACTACGCCAAAGACCC
ACGCAACGTGGCCCGCAAAGCCGAACGGTACATGCGTTCTACCGGCATTGCCGATACGGCCAATTTCGGTCCGGAATGCG
AGTTCTTTGTGTTCGACGATGTCCGCTTCGACAGCAGCCAGCAGCACGCCTTCTATTACATCGACAGTCAGGAAGGCCAG
TGGAATCGCGGCCGTGTGGAAGCTGGCGGTAATCGTGGACACAAAATTCGCTATGGCGAAGGTTACTTCCCGGTGCCTCC
CACCGACACTCTGCAGGAACTCCGTACCGAGATCATGCTCAGGCTTCAGGAATGCGGTGTGGGTGTCGAAGCTCAACATC
ACGAGGTCGCATCGGGCGGTCAATGCGAGGTTGATCTCAAGTTTGCACCTCTGGTTCAGAGTGCAGACCAGCTACTGCTC
TATAAGTACATCGTCAAGAACGTCGCCGCCCGGCATGGCAAGACCGCGACCTTCATGCCCAAGCCCATCTGGAATGATGC
CGGTTCCGGGATGCATCTTCACTTCTCACTCTGGAAGGATGCTCAAAATCTTTTCGCAGGTTCAGGCTATGCCGGCCTCA
GCGATACCGCCCTCTATGCGATTGGCGGAATTCTCAAGCATGCTTATTCTGTCATGGCTTTTGCCTGCCCCACCACCAAC
AGCTACAAACGCCTGGTTCCGGGATATGAAGCACCGGTCAACCTCACCTATAGCAGCCGCAATCGCTCAGCCGCCATTCG
CATTCCGGTCCATTCCCCACGACCTGAAAACAAGCGCTTTGAATTCCGTTGCCCGGATCCTTCCAGCAACTCTTATCTGG
CGATGTCGGCCATGCTGATGGCGGCCCTGGATGGCATTGAAAACCGGATCGATCCCGGCCCACCACTCGATAAAGATATC
TACGATCTGGCACCGGAAGAACTCGTGGATGTCGCCCGCACGCCACTTTCACTCGATGAGTCGCTGCTGGCGTTACGTAA
AGATCATGAGTTTCTACTCAGGGGTGATGTCTTCACTGAAGACGTGATTGATACCTGGATCTGGTACAAGTCTGAAAAAG
AAATCGAAGCTCTCAGACAACGCCCCCACCCCTTCGAATTTGCCATGTATTATGATATTTGA

Protein sequence :
MTDMTPREVLALCREREIYAVDLRFMDFPGLQKHFTIPVSELTEQSFDEGFGFDGSSIRGWQAINESDMLVVPEASTAIV
DPFMTRTLAMTCNIQDPITREDYAKDPRNVARKAERYMRSTGIADTANFGPECEFFVFDDVRFDSSQQHAFYYIDSQEGQ
WNRGRVEAGGNRGHKIRYGEGYFPVPPTDTLQELRTEIMLRLQECGVGVEAQHHEVASGGQCEVDLKFAPLVQSADQLLL
YKYIVKNVAARHGKTATFMPKPIWNDAGSGMHLHFSLWKDAQNLFAGSGYAGLSDTALYAIGGILKHAYSVMAFACPTTN
SYKRLVPGYEAPVNLTYSSRNRSAAIRIPVHSPRPENKRFEFRCPDPSSNSYLAMSAMLMAALDGIENRIDPGPPLDKDI
YDLAPEELVDVARTPLSLDESLLALRKDHEFLLRGDVFTEDVIDTWIWYKSEKEIEALRQRPHPFEFAMYYDI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 7e-80 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Plim_0683 YP_003628729.1 glutamine synthetase VFG1399 Protein 4e-110 54