Gene Information

Name : Plim_0611 (Plim_0611)
Accession : YP_003628657.1
Strain : Planctomyces limnophilus DSM 3776
Genome accession: NC_014148
Putative virulence/resistance : Unknown
Product : cystathionine gamma-synthase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : 2.5.1.48
Position : 791119 - 792267 bp
Length : 1149 bp
Strand : -
Note : PFAM: Cys/Met metabolism pyridoxal-phosphate- dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: afw:Anae109_3845 cystathionine gamma-lyase

DNA sequence :
GTGAAGTTTGAAACCCGCTGTGTTCATACCGGCGTCGATAAAGATGCCACCTACTTGAGTGCCACGACACCGATCTATCC
CACATCGACCTTCCGCTGGGACAATCTCGATTCTCATCGAGGTTTTGACTACACCCGCAGCGGCAATCCAACTCGGAAAG
CTCTCGAAGAAAATCTGGCGGCTCTTGAAGGAGGCGTCGATTGCCGGGCAACCTGCACAGGGATGTCAGCGATTGTGGCC
GCCCTGCAATTGGTGGCGCCAGGCGATCATGTGATTACCGGGCACGACATTTATGGTGGTACTTATCGACTCTTCGATAA
AGTGCTGCGAGACCAAGGAATCGATTTTTCGTTTGTCGATATGGGGCAACCGGCTCAGGTCGAAGCGGCCATCAAGAGCA
ATACGAAAGCAATCTGGATCGAAACACCTTCGAACCCCTTGCTGAATATCGTCGATCTGAATGCCATTGTGGCGATTGCC
AAAAAGCATCAGCTGATCACGATGGCCGACAACACATTCCTGTCACCTTACTTCCAGCGCCCTCTCGATCATGGTGTCGA
TGTCGTCATGCATTCGACCACGAAGTACCTCAATGGCCATAGTGATGTTGTCGGTGGTGCCGTCATCTGCAAGCATCAGC
AGCATGCCGAACGAATCAGTTATATCGTGAATGCCATGGGCCTGGCTTGTTCACCATTTGATGCCTGGCTGGTTTTACGC
GGGGTGAAGACACTGGGCCCGCGGATGGAAGCTCATCAGCGTGGTGCGGATGCCGTGGCTCGCTTTCTGAATGAGCATCC
CGGTGTCGAGAAGGTCTACTATCCCGGTTTACCAACGCATCCCGGTCATGACCTGGCCAAGAGGCAGCAGTTTGGTTTTG
GGGCAATGGTCAGCTTTGAACTCAACGGCGGGCGCTCTGCCGTCGAGAAGTTCCTCTCCAAGCTGAAGATCTTCCAACTG
GCAGAATCGTTAGGTGGCGTTGAATCACTGATCGATTACCCGGATACAATGACTCACTCGTCGATGTCCAAAGAAGACCG
ACGGACGGCTGGCATCACCGAGAACACATTGCGTCTTTCGGTTGGTATTGAGCATCCCGATGATCTCATCACCGATCTGG
CTGCTGGTCTTTCAGCAGTCAGTCAGTAA

Protein sequence :
MKFETRCVHTGVDKDATYLSATTPIYPTSTFRWDNLDSHRGFDYTRSGNPTRKALEENLAALEGGVDCRATCTGMSAIVA
ALQLVAPGDHVITGHDIYGGTYRLFDKVLRDQGIDFSFVDMGQPAQVEAAIKSNTKAIWIETPSNPLLNIVDLNAIVAIA
KKHQLITMADNTFLSPYFQRPLDHGVDVVMHSTTKYLNGHSDVVGGAVICKHQQHAERISYIVNAMGLACSPFDAWLVLR
GVKTLGPRMEAHQRGADAVARFLNEHPGVEKVYYPGLPTHPGHDLAKRQQFGFGAMVSFELNGGRSAVEKFLSKLKIFQL
AESLGGVESLIDYPDTMTHSSMSKEDRRTAGITENTLRLSVGIEHPDDLITDLAAGLSAVSQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-73 43
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 9e-75 43
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 2e-62 43