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Name : Plim_4189 (Plim_4189) Accession : YP_003632196.1 Strain : Planctomyces limnophilus DSM 3776 Genome accession: NC_014148 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 5353651 - 5355324 bp Length : 1674 bp Strand : - Note : KEGG: predicted gene, 100042430 DNA sequence : ATGAACATCGGGGCGACACTGGTCCGTAAAGGAGTCATTACTCCTGATCAGCTCAAAGAACTGGGTGTCCCCAGCGGTGC GCGCGTTGATCGACTGGTGATCGACAAAGGCTGGGCCGACGAAGGTCAAGTTCTGCAGACCATTGCCCAGGAACTGGGGA TGCGCTTCGTCGATATCAAGCACGAAGCAATTGATCGCGATCTGCTGATGCAGTTCCCCACGAACGCTGTCTTCCGGCAC TCTCTGCTGCCCATTGGTCGAAACAACGGCAGTGTCATTGTCGCCACATCAGACCCGTTCAACCTCGAAGCGCTCGAAGA GCTTTCCAGCGTCAGTGGCTTTCATCTCGAGCCAGTTCTGGCGCGCAAGCTCGACGTGATTGAGATGATTAAGGATCATC TCGGTGTCGGGGGCGATACACTCAACCAACTGGTGGCCCAAAGGGCTGCTGATGGTGTCGAACTTCTCAGTGAACCACTC GAACAGACTGGTGATCTCGAAGATGCCGCTGAAGCGGCCTCGGTCATCAAGCTGGTCAACGAGTTGCTGGTCGAAGCTCT CGAAATGCAGGCCAGTGATGTGCATATCGAGCCACAGGAAAATGGCCTGATCATCCGCTTCCGCGTCGATGGTTTGCTGC GTGTTCAGCCATTGCCTCCTTCGATCAATCAGTTCCAGCAGGCCATTGTCACCCGGCTCAAGATCATGTCCCGGCTGAAT ATTGCTGAGAAACGATTGCCACAGGACGGCCGCATCAAGCTCAAGATTAAGGGCCGCGAGATCGACGTACGCGTATCGAT TATCCCGATGCTGTATGGCGAAGGGGTCGTGATGCGTCTGTTGGATAAAGGCCGTATGGTCTTTAATCTGAAAAACGTGG GCATGCCGCCCATGGTCGATGTCCCCTTCCGCCAGTTGATCACACTCCCCCACGGAATTGTGCTGGTCACTGGCCCGACT GGTAGTGGTAAAACGTCGACGCTGTACAGTGCCCTCCACGAGATCAAAGACCCGTCGGTCAAAATCATCACGGTCGAAGA TCCTGTTGAATACCAGATGCCGGGCATCAGCCAGATTCAGGTCCATTCGAAAATCGGCCTGACGTTTGCCGCCGGTTTGC GCAGTATTCTACGTCATGACCCGGATGTGATTCTCATCGGGGAAATTCGCGATAGCGAGACGGCTGAAGCCGCCATTCAG GCTTCGCTCACGGGTCACCTGGTCTTCAGTACGTTGCACACCAACGATGCCCCGTCGGCTTTTGCACGACTGGTCGATAT GGGTGTGGAACCTTATCTCGTTTCGAGTACGGTGGCGGGTGTGCTGGCTCAGCGACTGGTCCGCCGACTTTGCAAACATT GCAAGGTGCCTGTCCAGGTGAAGCCCGGAATGCTTCCGGACGATTTTCCCGATCCGGATTGTGAATTCATCTACGAACCG GGAAGTTGCCGGGAATGTCGCAATACGGGGTACACGGGTCGTCAGGCAATCTTTGAACTGCTGCTGACCGATGCTGAAAT TGGCCGGCTATGTATTCGCCGGGCCGCTGCGACAGAAATCCGCTCTTACGCGCTCACTGCCGGTATGGTCACATTACGAG AATCAGGACTTTTGCGCGTCGCCGACGGCACAACCACTCTCGAAGAAGTTGATCGTCTCGCCAAACGAGAATAA Protein sequence : MNIGATLVRKGVITPDQLKELGVPSGARVDRLVIDKGWADEGQVLQTIAQELGMRFVDIKHEAIDRDLLMQFPTNAVFRH SLLPIGRNNGSVIVATSDPFNLEALEELSSVSGFHLEPVLARKLDVIEMIKDHLGVGGDTLNQLVAQRAADGVELLSEPL EQTGDLEDAAEAASVIKLVNELLVEALEMQASDVHIEPQENGLIIRFRVDGLLRVQPLPPSINQFQQAIVTRLKIMSRLN IAEKRLPQDGRIKLKIKGREIDVRVSIIPMLYGEGVVMRLLDKGRMVFNLKNVGMPPMVDVPFRQLITLPHGIVLVTGPT GSGKTSTLYSALHEIKDPSVKIITVEDPVEYQMPGISQIQVHSKIGLTFAAGLRSILRHDPDVILIGEIRDSETAEAAIQ ASLTGHLVFSTLHTNDAPSAFARLVDMGVEPYLVSSTVAGVLAQRLVRRLCKHCKVPVQVKPGMLPDDFPDPDCEFIYEP GSCRECRNTGYTGRQAIFELLLTDAEIGRLCIRRAAATEIRSYALTAGMVTLRESGLLRVADGTTTLEEVDRLAKRE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 6e-91 | 46 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 4e-91 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Plim_4189 | YP_003632196.1 | type II secretion system protein E | VFG2048 | Protein | 5e-91 | 49 |
| Plim_4189 | YP_003632196.1 | type II secretion system protein E | VFG0182 | Protein | 9e-87 | 49 |
| Plim_4189 | YP_003632196.1 | type II secretion system protein E | VFG1876 | Protein | 9e-89 | 46 |
| Plim_4189 | YP_003632196.1 | type II secretion system protein E | VFG0233 | Protein | 2e-79 | 45 |
