Gene Information

Name : Plim_3274 (Plim_3274)
Accession : YP_003631286.1
Strain : Planctomyces limnophilus DSM 3776
Genome accession: NC_014148
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : -
Position : 4225008 - 4226471 bp
Length : 1464 bp
Strand : -
Note : -

DNA sequence :
ATGTCTTACGTACTCCGTTCCGAAACGCCGTTTGCAAAAACCAAGATTATCGCGACAGTGGGTCCTGCCTGCTCGTCTCC
CGAAAAACTTCGCGAGCTGGCGATTGCCGGGGTGGACATTTTCCGGTTGAACTTTGCTCATGCCAAGTACGACATTCTCG
AAGGGGTGCTGGATTCGATTCGGAAAATCTCGGTCGAACTTGGCACACCACTGGGAGTGCTCGGTGATCTTTCTGGCCCC
AAAATTCGTCTGGGTCTGTTGCCAGAAGATGGCATTCGCTGCCGATATGGTGCCAAGTTTGAATTCGTCAGACAGGTTTC
CGCCGGTACAGACAACCAGCTCACCTGCACCTATGAGCAACTGATCGACGATCTGAGGCCTGGCGACCGAGTGCTGCTTG
CCGACGGAACGGTCTCCATGAAGGTTCTGGAGCAGGATGCGACGGCCGGAAAAGTGGTTTGCGAAGTCACCCAGGCGGGC
ATGATCCGCTCCAAACAAGGGGTTAATCTTCCCGGCGTGGCGCTGAGCACACCTTCGTTGACAATCAAAGACCGCGAAGA
TCTGCAATGGGCTCTGGATCATCAACTGGATTATATTGGGTTGAGCTTCGTGCGTTCCGCCCAGGATTTGCGAGATCTGC
GGAAGGTGATTGCCGAGCATCCCACGACGACGCCTCCGTGGATTGTCGCCAAGATTGAAAAAGTCGAGGCGATTAATGAT
CTGGAAGCGATTATCGGTGAGACGGATGCTGTTATGGTCGCCCGCGGTGATCTGGGTGTCGAAGCTGATGTGGATCGTGT
TCCCGTACTTCAAAAGCGGATTATCCGCCTATGCAACGAGCATCGAATTCCGGTTATTACCGCCACACAAATGCTCGACA
GTATGCAGAAAAATGAACTTCCCACGCGGGCTGAAGCGACGGACGTGGCGAATGCCGTCCTCGATGGAACCGATGCCGTG
ATGCTTTCGGGCGAGACGGCCGTGGGTGATCATCCCGTGGCGGCTGTTTCCATGATGAGCCGCATTGCCGGACATGCCGA
GCGGCTGCTTGATCCTCATAAGTTCGTCGACAAGTTGGCTCTTCCCCGCAATCGGGCCACCGCCATTACTGAAGCGGTGG
TTTGTGGTGCTGGCAATGCCGCCGAGCAACTGGGAGCGAACCTGATTGTGGTCGCCACTCGCGGCGGCAAAACAGCCATG
GCGCTTTCAAGACAGCGCGGGACGGTTCCCATTCTCGCTCTGACGGATCGACCGGAAATTGCCCGACGGATGAAGCTCTA
CTGGGGGGTCACGCCCCTCGCGACAGAAGCGGTCAAGTACCCACCCAGCGAACTTCTGGCGTTCGTCGCCAATTACGGCA
AAGAGCATGGCCTGCTCTCATCTGGCAGCAAGCTCGTTCTGGTCGGCAACTCGGACTGGAATCAGGAATATCATGACGTG
ATGATTGTGCATGTCATGCCTTGA

Protein sequence :
MSYVLRSETPFAKTKIIATVGPACSSPEKLRELAIAGVDIFRLNFAHAKYDILEGVLDSIRKISVELGTPLGVLGDLSGP
KIRLGLLPEDGIRCRYGAKFEFVRQVSAGTDNQLTCTYEQLIDDLRPGDRVLLADGTVSMKVLEQDATAGKVVCEVTQAG
MIRSKQGVNLPGVALSTPSLTIKDREDLQWALDHQLDYIGLSFVRSAQDLRDLRKVIAEHPTTTPPWIVAKIEKVEAIND
LEAIIGETDAVMVARGDLGVEADVDRVPVLQKRIIRLCNEHRIPVITATQMLDSMQKNELPTRAEATDVANAVLDGTDAV
MLSGETAVGDHPVAAVSMMSRIAGHAERLLDPHKFVDKLALPRNRATAITEAVVCGAGNAAEQLGANLIVVATRGGKTAM
ALSRQRGTVPILALTDRPEIARRMKLYWGVTPLATEAVKYPPSELLAFVANYGKEHGLLSSGSKLVLVGNSDWNQEYHDV
MIVHVMP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 2e-62 41
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 1e-62 41
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 1e-62 41
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 5e-62 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Plim_3274 YP_003631286.1 pyruvate kinase VFG0479 Protein 4e-63 41