Name : Plim_0003 (Plim_0003) Accession : YP_003628055.1 Strain : Planctomyces limnophilus DSM 3776 Genome accession: NC_014148 Putative virulence/resistance : Virulence Product : response regulator receiver Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 5023 - 5730 bp Length : 708 bp Strand : - Note : PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: swi:Swit_3444 two component transcriptional regulator DNA sequence : ATGCGTGCCTTGATTGTTGAAGATCAGCCAGATCTGCTGTTTGCACTTCGAGGAATGCTGGAAGATGAAGGGTACGCCGT AGATACGGCTGCCGATGGTGAATCGGGGCTGCATCGTGCACTTGTCTGGGAATACGATGTCATTGTGCTTGATTGGATGC TCCCCCGGCTGTCCGGTTTTGATCTGCTGAAACAACTTCGCACGAAGAAATCAACACCCGTGCTCATGCTCACAGCCCGT GATGGTGTGGCTGATCGAGTGCAAGGTCTCGATCAGGGGGCCGATGATTACCTCGTGAAGCCTTTTGATCGTGGCGAACT TCTGGCCAGACTGCGGGCGTTAATCCGGCGGGCAGCCGGTGAATCCGAATCATTGCTCGAACTGGGTCAGGGAGTGACGA TCAATCTCATTCATCGCAAAGTCTTCCGGGACGATGTCGAGATTGTGCTGACAGCTCGCGAATACTCGATTTTTGAATAT CTGGCACTGCATAGGGGTCGTGTCGTTCCCCGTACCGATTTGTACGATCACATCTTCGATGAAAATGACGAATCTCTCTC GAACCTGCTGGATGTGCATATCTCGAATCTCAGGCGGAAACTTGGCCGTGATGTGATTGAGACCCGTCGTGGCTTGGGGT ACATCATTCATAGTCAGGCATCTTCTGCAGAACTGGTGGATGATGCATCCCACGATTCTGCTTCGTAA Protein sequence : MRALIVEDQPDLLFALRGMLEDEGYAVDTAADGESGLHRALVWEYDVIVLDWMLPRLSGFDLLKQLRTKKSTPVLMLTAR DGVADRVQGLDQGADDYLVKPFDRGELLARLRALIRRAAGESESLLELGQGVTINLIHRKVFRDDVEIVLTAREYSIFEY LALHRGRVVPRTDLYDHIFDENDESLSNLLDVHISNLRRKLGRDVIETRRGLGYIIHSQASSAELVDDASHDSAS |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
armR | AAN62112.1 | putative response-regulator ArmR | Not tested | PAGI-2(C) | Protein | 9e-18 | 42 |
copR | NP_460069.2 | transcriptional regulatory protein YedW | Not tested | SPI-5 | Protein | 2e-24 | 41 |
copR | AAC33719.1 | regulatory protein CopR | Not tested | SPI-5 | Protein | 8e-24 | 41 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
Plim_0003 | YP_003628055.1 | response regulator receiver | BAC0487 | Protein | 2e-24 | 46 |
Plim_0003 | YP_003628055.1 | response regulator receiver | NC_002952.2859858.p0 | Protein | 2e-24 | 43 |
Plim_0003 | YP_003628055.1 | response regulator receiver | NC_007622.3794948.p0 | Protein | 2e-24 | 43 |
Plim_0003 | YP_003628055.1 | response regulator receiver | NC_003923.1003417.p0 | Protein | 2e-24 | 43 |
Plim_0003 | YP_003628055.1 | response regulator receiver | NC_013450.8614146.p0 | Protein | 2e-24 | 43 |
Plim_0003 | YP_003628055.1 | response regulator receiver | NC_002951.3238224.p0 | Protein | 2e-24 | 43 |
Plim_0003 | YP_003628055.1 | response regulator receiver | NC_007793.3914065.p0 | Protein | 2e-24 | 43 |
Plim_0003 | YP_003628055.1 | response regulator receiver | NC_002758.1121390.p0 | Protein | 2e-24 | 43 |
Plim_0003 | YP_003628055.1 | response regulator receiver | NC_010079.5776364.p0 | Protein | 2e-24 | 43 |
Plim_0003 | YP_003628055.1 | response regulator receiver | AE015929.1.gene1106. | Protein | 5e-20 | 42 |
Plim_0003 | YP_003628055.1 | response regulator receiver | BAC0197 | Protein | 1e-27 | 42 |
Plim_0003 | YP_003628055.1 | response regulator receiver | BAC0125 | Protein | 2e-29 | 42 |
Plim_0003 | YP_003628055.1 | response regulator receiver | BAC0347 | Protein | 1e-23 | 41 |
Plim_0003 | YP_003628055.1 | response regulator receiver | BAC0111 | Protein | 6e-25 | 41 |
Plim_0003 | YP_003628055.1 | response regulator receiver | HE999704.1.gene1528. | Protein | 3e-21 | 41 |
Plim_0003 | YP_003628055.1 | response regulator receiver | BAC0288 | Protein | 2e-24 | 41 |
Plim_0003 | YP_003628055.1 | response regulator receiver | NC_002516.2.879194.p | Protein | 5e-26 | 41 |
Plim_0003 | YP_003628055.1 | response regulator receiver | BAC0308 | Protein | 2e-22 | 41 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
Plim_0003 | YP_003628055.1 | response regulator receiver | VFG0473 | Protein | 1e-28 | 45 |
Plim_0003 | YP_003628055.1 | response regulator receiver | VFG0596 | Protein | 9e-25 | 41 |