Gene Information

Name : Plim_2757 (Plim_2757)
Accession : YP_003630779.1
Strain : Planctomyces limnophilus DSM 3776
Genome accession: NC_014148
Putative virulence/resistance : Virulence
Product : response regulator receiver
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3574192 - 3574869 bp
Length : 678 bp
Strand : -
Note : -

DNA sequence : 
ATGAATGTTCTCGTGATTGAAGACGACCCCGCGATCGGCCGCTCACTACAGCAAGGATTCTCCGAAGCCGGGCATCATTG
CGTCTGGCAGCAGAACGGGATCTCCGGTTACGAAACAGCACTCTCCCGCCAGGCCGATGCGATTGTTCTCGATCTGCTGC
TTCCCGGAGAGAGTGGTTGGGATGTCCTGCAAAAACTGCGAGCGGCTGGAGTTCAGGCCCCGATCATCCTGTTGACAGCA
CTCGGTTCTATCGATGATCGAGTCAAAGGACTCAAACTCGGGGCCGACGACTATCTCGTCAAACCGTTCGACTTCGCTGA
ACTCATGGCTCGCCTCGAAGCTGTCCAGAGACGGACTGGCAACAAGCCTTCCATGATTCTCCAAGCGGCAGGGCTGACTC
TGGATCTCACGACACGTCGGGTCACTTCGAACGATACGGAAAAAGAGATCGATCTCACTCCCATCGAGTTCAGCCTGCTT
GAACTTCTCATGCGCTATGCCGGCCAGGTTGTGACCAGAAAAATGCTGTGCGAACACGTCTGGGGTTTCAACTGGGACGG
CACCACAAACGTCATTGAAGTGCATGTCAACCGGCTCCGCGGCAAACTCGATAAAGACCGCGATCAATCAATTATCAAAA
CTGTGCGGGGACGAGGTTATGCCCTTCCAGCATCTTAG

Protein sequence : 
MNVLVIEDDPAIGRSLQQGFSEAGHHCVWQQNGISGYETALSRQADAIVLDLLLPGESGWDVLQKLRAAGVQAPIILLTA
LGSIDDRVKGLKLGADDYLVKPFDFAELMARLEAVQRRTGNKPSMILQAAGLTLDLTTRRVTSNDTEKEIDLTPIEFSLL
ELLMRYAGQVVTRKMLCEHVWGFNWDGTTNVIEVHVNRLRGKLDKDRDQSIIKTVRGRGYALPAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-33 45
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 9e-33 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Plim_2757 YP_003630779.1 response regulator receiver BAC0638 Protein 8e-40 49
Plim_2757 YP_003630779.1 response regulator receiver BAC0111 Protein 2e-47 47
Plim_2757 YP_003630779.1 response regulator receiver BAC0125 Protein 2e-42 47
Plim_2757 YP_003630779.1 response regulator receiver BAC0083 Protein 3e-44 46
Plim_2757 YP_003630779.1 response regulator receiver BAC0197 Protein 3e-44 45
Plim_2757 YP_003630779.1 response regulator receiver BAC0347 Protein 2e-42 44
Plim_2757 YP_003630779.1 response regulator receiver BAC0308 Protein 1e-41 44
Plim_2757 YP_003630779.1 response regulator receiver NC_002516.2.879194.p Protein 2e-27 41
Plim_2757 YP_003630779.1 response regulator receiver CP001918.1.gene5135. Protein 2e-21 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Plim_2757 YP_003630779.1 response regulator receiver VFG0596 Protein 6e-34 45
Plim_2757 YP_003630779.1 response regulator receiver VFG1390 Protein 3e-34 41