|
Name : Plim_2046 (Plim_2046) Accession : YP_003630073.1 Strain : Planctomyces limnophilus DSM 3776 Genome accession: NC_014148 Putative virulence/resistance : Virulence Product : ATP-dependent chaperone ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 2655723 - 2658338 bp Length : 2616 bp Strand : - Note : KEGG: gme:Gmet_2851 ATPase AAA; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA; ATPase AAA central domain protein; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: ATPase AAA DNA sequence : ATGGCATTCCGAGCCGACAAACTGACTGTTAAAGCCCAGGAGGCACTGCAGGAAGCTCAGCAGCTTGCAGAAAACAACGG GCAACCTCAGGTGCAGCCTTTGCATCTGATCAAAGCCTTGTTGGACGAGTCGAGCGGCGTTGTACGCCCGATTCTCGAAA AAATCGGCGTCCGGCTGACTCAACTCACCAGCCTGGTTGATAGCGAAATTTCGCGTTTACCGAAGGTTTCCGGGAGTTCA TCTCAGGTGGGCGCGTCGAGTGCGCTCATGGATGTCCTGAACAAAAGCCAGCAGTTGGCTGACCAGATGAAGGATCAGTT CGTTTCAACCGAACATCTGCTGTTGGCGCTGATCAAGAGTGACGACGTCGCTGGTCGATTGCTGAAAATGAATGGAGTTG AGGAATCCGATGTTCTCAAGGCCCTGCAGTCAATTCGCGGGCATCAGCAAGTGACTGATCAGAATCCGGAAGATAAATAT CAGGCCCTCGAAAAGTATGGCAAAGACCTTGTCGCACTGGCTCGATTGGGGAAGATCGACCCCGTGATTGGCCGCGACAG CGAGATTCGTCGTGTGATTCAAGTCCTTTCACGCCGCCGCAAGAACAACCCCGTGCTGATTGGTGATGCCGGTGTCGGCA AGACGGCGATTGTCGAAGGCCTGGCTCATCGCATTGTGCTGGAAGATGTACCTCAAAACCTCAAAAACAAGCGTGTCATC GCTCTCGATATGGGAGCTTTGATTGCCGGTGCCAAATATCGCGGCGAGTTCGAGGATCGACTGAAGGCTGTGCTGAAGGA AGTGACCGAATCCGAAGGGAAAGTCATTCTCTTTATCGATGAGCTTCATACGGTTGTGGGTGCCGGTGCATCGGAAGGGG CTGTGGACGCTTCAAACCTGTTGAAGCCAGCCCTTGCCCGGGGTGAACTCCATTGCGTCGGAGCGACCACGCTCGACGAA TACCGCAAATATATCGAGAAAGATCCTGCTCTCGAACGACGCTTCCAGCCAGTGCTGGTCAATGAACCCAGTGTGGAGGA TACGATCTCGATTTTGCGCGGGCTTAAGGAACGATATGAGTCACATCACGGGGTCCGAATTACCGACGATGCGATTATCA GCGCTGCCAAACTGTCGGATCGTTACATCGCGGATCGCTTTCTGCCTGATAAGGCCATCGACCTGATCGATGAGGCTGCC AGCCGGTTGCGCATGGAAATGGATTCGATGCCAGCCGAAATCGACGAAGCCACACGAGCATTAACACGCCTGCAGATCGA GGCCACAGCTCTGACAAGAGAAACTTCTCCAGACAGTCAGCAGCGTCTGGCTTCGATCCGAAAGGAGATTGCCGAGAAAG AAGAATCGGTGACGGCTCTCAAAGCGCGCTGGCAGACCGAGAAAGAAGCACTTTCCGGCATTCGCCCCATGAAGGAAAAA ATCGAGAAATTGCGAACGGCTTATGAACAGGCTTTTGCTCAGGCCCAGCGGACCAACAATAACGAAGACTTCGTGCGTGC TTTCCAGACGGAGCAGGAATTGAAAGCCGCACAGGCCGCGTTGCAGGCAGCCGAATCGCGAGTAGCCACTTTGGATAACA CCCAGCGGCTGCTGCGCGAAGAAGTGACTGATGAGGATATCGCCAGAGTGGTCAGCCATTGGACGGGGATTCCCGTAGCC CGCATGATGCAGACTGAAAAGGCGAAGCTGCTCTCCATGGAAGATCAGATTCATAAGCGGATGATCAACCAGGAAGAGGC TGTCACAGCGGTTTCGAATGCCGTCCGCCGCGCTCGTTCGGGTATGCAGGACCCCAATCGACCGATTGGCTCCTTCATGT TTCTGGGGCCGACCGGTGTGGGCAAGACGGAACTTTGCAAGGCCTTGGCCGAGTTTCTGTTTGATGATGAAAAGGCGATG GTGCGTATCGATATGAGCGAGTTCATGGAAAAGCACTCCGTGGCTCGTCTTATTGGCGCACCACCCGGTTATGTGGGCTA CGAAGAAGGCGGCAAGCTGACAGAGGCTGTTCGCCGCAGGCCCTACAGCGTGCTGTTGCTTGATGAAGTCGAGAAAGCCC ATCGCGATGTCTTCAACGTCTTGCTGCAGGTTCTCGATGATGGCCGTTTGACGGATGGTCAGGGTCGAACTGTGGACTTC ACGAACACGATTATCGTCATGACGTCGAATATTGGCAGTCAACTCATTATGGATCTTTCGGGAACTGATGATGAAGGGGA AATCCACAGCCGAGTGATGGGAGCACTGCGAAAAGAGTTCTTGCCCGAGTTTCTCAACCGCGTGGATGAAGTGATAGTTT TCCATCCCCTCGGAAGAAAGGAAATTCGGCAGATTGTCGATCTGCAGCTTGCCAAACTCATCAAGCGGCTGGCCGAACAC GATATTCGCCTCGAAGTCAGCGACAGCGTGAAGGATGTTCTCGCGACCGAAGGTTACGATCCCACCTATGGGGCCCGGCC TCTCAAACGAGTCATTCAGCAAAGGCTGCAGAACGAACTAGCCAACTCGTTACTTTCCGGCGAATTCAGTGAATCGAATG TCGTAAGAGTCGATGCTCATCACGGCGAGTTTACTTTCACGGCCTCCAGAGAATAA Protein sequence : MAFRADKLTVKAQEALQEAQQLAENNGQPQVQPLHLIKALLDESSGVVRPILEKIGVRLTQLTSLVDSEISRLPKVSGSS SQVGASSALMDVLNKSQQLADQMKDQFVSTEHLLLALIKSDDVAGRLLKMNGVEESDVLKALQSIRGHQQVTDQNPEDKY QALEKYGKDLVALARLGKIDPVIGRDSEIRRVIQVLSRRRKNNPVLIGDAGVGKTAIVEGLAHRIVLEDVPQNLKNKRVI ALDMGALIAGAKYRGEFEDRLKAVLKEVTESEGKVILFIDELHTVVGAGASEGAVDASNLLKPALARGELHCVGATTLDE YRKYIEKDPALERRFQPVLVNEPSVEDTISILRGLKERYESHHGVRITDDAIISAAKLSDRYIADRFLPDKAIDLIDEAA SRLRMEMDSMPAEIDEATRALTRLQIEATALTRETSPDSQQRLASIRKEIAEKEESVTALKARWQTEKEALSGIRPMKEK IEKLRTAYEQAFAQAQRTNNNEDFVRAFQTEQELKAAQAALQAAESRVATLDNTQRLLREEVTDEDIARVVSHWTGIPVA RMMQTEKAKLLSMEDQIHKRMINQEEAVTAVSNAVRRARSGMQDPNRPIGSFMFLGPTGVGKTELCKALAEFLFDDEKAM VRIDMSEFMEKHSVARLIGAPPGYVGYEEGGKLTEAVRRRPYSVLLLDEVEKAHRDVFNVLLQVLDDGRLTDGQGRTVDF TNTIIVMTSNIGSQLIMDLSGTDDEGEIHSRVMGALRKEFLPEFLNRVDEVIVFHPLGRKEIRQIVDLQLAKLIKRLAEH DIRLEVSDSVKDVLATEGYDPTYGARPLKRVIQQRLQNELANSLLSGEFSESNVVRVDAHHGEFTFTASRE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 5e-108 | 42 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 7e-108 | 42 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 6e-111 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Plim_2046 | YP_003630073.1 | ATP-dependent chaperone ClpB | VFG2076 | Protein | 2e-125 | 41 |
