Gene Information

Name : Plim_1940 (Plim_1940)
Accession : YP_003629969.1
Strain : Planctomyces limnophilus DSM 3776
Genome accession: NC_014148
Putative virulence/resistance : Unknown
Product : argininosuccinate lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0165
EC number : -
Position : 2526439 - 2527821 bp
Length : 1383 bp
Strand : -
Note : TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase; KEGG: hypothetical protein; K01755 argininosuccinate lyase

DNA sequence :
GTGGCAGCTAAAGCTTGGGGTGGTGCATTTGATGGGCAGACGGATCCTCGCGTGGAACGTTTCACCGAATCGATCAGCTT
CGACGCCCGGCTCGCAGAGGTCGATGTTCGCGGTTCGAAGGCTCACTCGCAGATGCTCTCGGAAGTCGGCCTGATCAGCG
AGCAGGAAAAGAACCAGATTCACGCCGCACTCGATGAGATTCTGGCCACGATTCTCGCAGGGAAATTTCCCTTTCGAATC
GAACTGGAAGACATCCACATGCATATCGAGTCGGCTTTGATCGAACGGTTGGGAGATACCGGTCGCAAGCTGCACACGGG
CCGAAGTCGCAATGATCAGGTGGCAACCGATCTCAAACTTTATGTACGAGACGCGATGGATCGGCTTGATGGATTGCTTG
TTGAACTGCAGCGGGCGTTTATTGGGCGTGCGGAGCGAGATGAGGGGGTAATTTTGCCCGGCTACACGCATCTGCAGCGT
GCTCAGCCAGTGCTTGCCTCACAGTATTGGTGTGCCTGGTGCGAGAAATTTGAGCGTGATCGAACTCGCCTGCGGGATGC
TCGCGTGCGCCTCAATGAATCTCCGCTGGGGGCCGCTGCTCTGGCTGGTACAACGTTGCCGATTAACCGTCAGCGAACAG
CCGAACTCTTGGGATTCGACCGGCCGGCTGCCAATAGTTTGGATGTTTCCAGCGATCGCGACTTTGTCGCCGAGACCGTT
TTTGATCTCACTTTGATCGCCACGCATTTGAGCAACTGGGCCGAAGAATGGATTCTGTGGTGTACGACCGAGTTTGGCTT
CATCAAATTGCCGAATGCCTACACGACCGGTTCATCGATCATGCCTCAAAAGAGAAATCCCGATGTACTGGAGCTGATTC
GCGGAAAAGCAGGCCGAGTGGTCGGTGATCTGCAGCATGTCCTCGTGCTCATTAAGGGCCTGCCCCTGGCGTACAATCGC
GATCTGCAGGAAGACAAGGTGGCCTTGTTCGATGCCCTCGATCAGGTTGAGGCGAGTCTCGAACTGGCTGCTGCTATTGT
TGAGCACGCCGAACTGAAAAAAGAGACGATCTCGGCCCGCATTGAAGAAGGGTTTCTGGATGCAACGACGCTCATGGAGT
ATCTGATCCAGAAGGGTGTCCCCATGCGGACAGGCCATGAGACTGTGGGCAAGCTCGTGAGGCTCGCGGAATCGAAGTCC
TGCACGCTGGCGCAGTTGCCTCTGGCTGATTTTCAGTCGATTGCACCACAGGTCGAACAGGATGTGTTCGAAGCGTTGGG
TGTGGTGAATGCTGTCCGCCGCTTCCGCAGTGAAGGTTCGGGGGGAACGGCATCCGTCGCCCAGCAGGTCGCCAAGTGGA
AACAGAAACTGGAGTCAACTTAA

Protein sequence :
MAAKAWGGAFDGQTDPRVERFTESISFDARLAEVDVRGSKAHSQMLSEVGLISEQEKNQIHAALDEILATILAGKFPFRI
ELEDIHMHIESALIERLGDTGRKLHTGRSRNDQVATDLKLYVRDAMDRLDGLLVELQRAFIGRAERDEGVILPGYTHLQR
AQPVLASQYWCAWCEKFERDRTRLRDARVRLNESPLGAAALAGTTLPINRQRTAELLGFDRPAANSLDVSSDRDFVAETV
FDLTLIATHLSNWAEEWILWCTTEFGFIKLPNAYTTGSSIMPQKRNPDVLELIRGKAGRVVGDLQHVLVLIKGLPLAYNR
DLQEDKVALFDALDQVEASLELAAAIVEHAELKKETISARIEEGFLDATTLMEYLIQKGVPMRTGHETVGKLVRLAESKS
CTLAQLPLADFQSIAPQVEQDVFEALGVVNAVRRFRSEGSGGTASVAQQVAKWKQKLEST

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00324 YP_008207789.1 Argininosuccinate lyase Not tested AbaR25 Protein 1e-84 49
BJAB0868_00328 YP_008211654.1 Argininosuccinate lyase Not tested AbaR26 Protein 1e-84 49