Gene Information

Name : Plim_1896 (Plim_1896)
Accession : YP_003629925.1
Strain : Planctomyces limnophilus DSM 3776
Genome accession: NC_014148
Putative virulence/resistance : Resistance
Product : protein-tyrosine phosphatase, low molecular weight
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0394
EC number : -
Position : 2474578 - 2474994 bp
Length : 417 bp
Strand : +
Note : PFAM: protein-tyrosine phosphatase, low molecular weight; SMART: protein-tyrosine phosphatase, low molecular weight; KEGG: aba:Acid345_2957 protein tyrosine phosphatase

DNA sequence : 
ATGAAACGCGTACTCATTCTTTGCACGGGAAACTCCTGCCGCTCGCAAATGGCCGAAGGTTTATGGAACACTCTGGGCCA
GCCTACGTGGGAAGCGGTCTCGGCAGGCTCACGTCCTGCCGGCTACGTTCATCCGCTGGCCGTGCGAGCCATGGGAGAAC
TGGGGATCGATATTTCGAACCTCGTGAGTAAGTCGGTCGCACCGTATCAGAATGAAAACTTCGACCTGGTGGTCACGGTG
TGCGATAACGCCAAAGAGGCATGCCCTGTATTCCCAGGAGCGAAACTCACGCTGCATTGGCCATTTGCAGACCCGGCCCA
CGCCGAAGGAAACGACGAGGAAAAGATGGTCATGTTCCGCCGTGTGCGTGATGAAATCCGTGATACCATCAGTGGCTATC
TCAAAACTGTCTCTTGA

Protein sequence : 
MKRVLILCTGNSCRSQMAEGLWNTLGQPTWEAVSAGSRPAGYVHPLAVRAMGELGIDISNLVSKSVAPYQNENFDLVVTV
CDNAKEACPVFPGAKLTLHWPFADPAHAEGNDEEKMVMFRRVRDEIRDTISGYLKTVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsC YP_252016.1 arsenate reductase Not tested SCCmec Protein 6e-16 44
arsC YP_005754064.1 arsenate reductase Not tested Type-XI SCCmec Protein 2e-15 44
arsC YP_252023.1 arsenate reductase Not tested SCCmec Protein 8e-17 43
arsC AFC76434.1 ArsC Not tested AbaR5 Protein 1e-20 42
arsC CAJ77017.1 arsenate reductase Not tested AbaR1 Protein 7e-21 42
BCAM0234 YP_002232865.1 putative arsenate reductase Not tested BcenGI11 Protein 2e-13 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Plim_1896 YP_003629925.1 protein-tyrosine phosphatase, low molecular weight BAC0581 Protein 1e-20 49
Plim_1896 YP_003629925.1 protein-tyrosine phosphatase, low molecular weight BAC0032 Protein 4e-16 44
Plim_1896 YP_003629925.1 protein-tyrosine phosphatase, low molecular weight BAC0580 Protein 3e-16 43