Gene Information

Name : Plim_1875 (Plim_1875)
Accession : YP_003629904.1
Strain : Planctomyces limnophilus DSM 3776
Genome accession: NC_014148
Putative virulence/resistance : Resistance
Product : response regulator receiver
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2449723 - 2450415 bp
Length : 693 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: scl:sce1356 two component system transcriptional regulatory protein

DNA sequence : 
ATGCAAGCCAACAGCCATCACATTCTGATCATCGAAGATGAGCAACCGATTCGCAGGTTCCTCAAGGCCTCGTTATCGAA
CGAGGGCTATCGGGTCAGTGAAGCAGTGGCCGGTGAAGAAGGTTTGCGGATGGCGTCGGCCCAACCACCCGATCTTGTGA
TTCTCGATCTGGGTCTGCCCGACCTCGATGGACAAGACGTGCTCAAGCGGCTTCGGGAATGGTACACTTCTCCTGTGATC
GTCCTCTCCGCACGGGACCAGGAGACGCAGAAGATCAAGGCACTCGACAGTGGTGCCGATGACTACTTGACCAAGCCGTT
CGGCATCGGAGAGCTTCTCGCCCGCATGCGAACGGCCATGCGTCATGCTCACCGAGTCGGGCCGGAGGCGACGACCGCCA
CAATTGGTGCTCTTCGTGTTGATCTGGCAGCCCGGCTCGTTTACCGCAGCGACAAAGAGGTGCATCTGACGCCGCTCGAA
TACAAGCTTCTGGTGACGATGATCAAGCACGCCGGGAAAGTTCTGACGCACCGGTTTCTGCTGCGTGAAGTGTGGGGACC
GCAGGACTCGCAGGAGAACCATTACCTGCGGGTCTTCATCGCCAGCATGCGACGGAAACTCGAAGACGATCCGGCCCGAC
CCCGATACATCCTGACAGAACAAGGAGTCGGTTACCGACTCGCTGTGGAATGA

Protein sequence : 
MQANSHHILIIEDEQPIRRFLKASLSNEGYRVSEAVAGEEGLRMASAQPPDLVILDLGLPDLDGQDVLKRLREWYTSPVI
VLSARDQETQKIKALDSGADDYLTKPFGIGELLARMRTAMRHAHRVGPEATTATIGALRVDLAARLVYRSDKEVHLTPLE
YKLLVTMIKHAGKVLTHRFLLREVWGPQDSQENHYLRVFIASMRRKLEDDPARPRYILTEQGVGYRLAVE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0571 NP_814337.1 DNA-binding response regulator Not tested Not named Protein 8e-32 46
ef0091 AAM75294.1 EF0091 Not tested Not named Protein 6e-32 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Plim_1875 YP_003629904.1 response regulator receiver BAC0308 Protein 1e-20 41