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Name : Plim_1868 (Plim_1868) Accession : YP_003629897.1 Strain : Planctomyces limnophilus DSM 3776 Genome accession: NC_014148 Putative virulence/resistance : Virulence Product : Retinal dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : - Position : 2439605 - 2441083 bp Length : 1479 bp Strand : + Note : PFAM: aldehyde dehydrogenase; KEGG: noc:Noc_2605 aldehyde dehydrogenase DNA sequence : ATGACAACCACCCTGACTCCGCCTCGAAAGTATGCCGCTCCAGCCATTAAACAGACCAAGCTCCTCATTGGCGGCGAATG GTGCGATGCTGCCGATGGCCGAACTTTTGCCACTTACAATCCTGTGAACGAAGAGAAGATCGCGGATGTTGCTCTCGCTG TAAAAGTGGATGTCGATCGCGCTGTAGCCGCCGCTCGGAAGGCCTTCGAATCGGGACCGTGGCATACCATGGATGCCCGT GATCGCGGCCAACTGATCGGCAAACTGGCAGATCTCATCGAAGCCAACTTTGACGAGTTGGCCGCTCTCGAAACGCTCGA CAATGGCAAGCCAATTCGCGATAGCAGGGGTGCTGATCTTCCGCTGGTGATTGATTGCCTTCGCTACTATGCGGGCTGGG CCGACAAGATTGTGGGCCAGACAATTCCTGTTCGAGGTGAATACTTCACCTACACCCGCCGTGAACCGACTGGCGTCTGC GGACAGATCATTCCGTGGAACTTTCCCATGCTGATGGTTGCCTGGAAGTGGGGCCCTGCGCTCGCCGCCGGCTGCACCAT CGTCATGAAACCTGCCGAGCAAACACCTCTCACATGCCTCCGCTTGGCTGAACTCGCGATGGAAGCTGGCTTTCCCCCCG GTGTGATCAACGTCGTCACTGGCTTTGGTGAAACGGGGGCCGCCATCGTCAAGCACCCCGATGTCGACAAGATTGCCTTC ACCGGGTCCGGCGAAACAGCCCAGCGGATCATGGTCGACGCCGCTACCACACTGAAACGAATCACTTTTGAACTGGGCGG CAAGAGCCCGAACATCGTCTTCGCCGACGCGAACCTCGATGCCGCTGTCGCCGGAGCGGAGTTCGGCCTCTTCTTCAACC AGGGGCAGTGCTGCTGTGCGGGCAGCCGGTTGTTCGTGGAAAAATCAATCCACGAGGAGTTCGTCGCTAAGGTTGTTTCC CGTGCGAAGGCCCGCAAACTGGGAAATCCACTTGAGATGGAGACCACTCAAGGGCCGCAGGTCGACCGCGATCAATTCGA CAAGATCATGAAATATATCGAACTCGGCAAATCGCAGGGGGCCACCTGCGTCACCGGCGGCCACCGCGTGGGCGAGAGTG GCTTCTTCGTTGCGCCGACCGTTTTCGACGATGTCACCGACGACATGGCCATTGCGACCGATGAAATCTTTGGGCCAGTG CTCAGCATTCTGCCCTTTGAATCCATCGAGGAAGTGACTCGTCGCGCCAATGCCACCACGTTTGGTCTGGCGGCTGCCGT CTGGACGCGGGATGTCGCCAAAGCGCACCGCATTGCCCATAACGTGCGGGCAGGAACCGTCTGGATCAACTGCTACGATG TTTTTGACGCCGCTGCCCCATTCGGCGGCTTCAAAATGAGCGGCATGGGGCGCGAACTCGGCGAAGCGGCCCTCGCCAGC TACACGGAACTCAAAACGGTCACCATGTCCCTGAAGTGA Protein sequence : MTTTLTPPRKYAAPAIKQTKLLIGGEWCDAADGRTFATYNPVNEEKIADVALAVKVDVDRAVAAARKAFESGPWHTMDAR DRGQLIGKLADLIEANFDELAALETLDNGKPIRDSRGADLPLVIDCLRYYAGWADKIVGQTIPVRGEYFTYTRREPTGVC GQIIPWNFPMLMVAWKWGPALAAGCTIVMKPAEQTPLTCLRLAELAMEAGFPPGVINVVTGFGETGAAIVKHPDVDKIAF TGSGETAQRIMVDAATTLKRITFELGGKSPNIVFADANLDAAVAGAEFGLFFNQGQCCCAGSRLFVEKSIHEEFVAKVVS RAKARKLGNPLEMETTQGPQVDRDQFDKIMKYIELGKSQGATCVTGGHRVGESGFFVAPTVFDDVTDDMAIATDEIFGPV LSILPFESIEEVTRRANATTFGLAAAVWTRDVAKAHRIAHNVRAGTVWINCYDVFDAAAPFGGFKMSGMGRELGEAALAS YTELKTVTMSLK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF SG19 | AAN62241.1 | putative aldehyde dehydrogenase | Not tested | PAGI-3(SG) | Protein | 4e-82 | 47 |
| VC0819 | NP_230467.2 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 2e-84 | 47 |
| aldA | AAK20747.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 8e-85 | 46 |
| aldA | AAK20776.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 8e-85 | 46 |
| aldA | AAC12273.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 8e-85 | 46 |
| aldA-1 | YP_001216300.1 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 3e-84 | 46 |
| hpaE | AAO17179.1 | HpaE | Not tested | tcd island | Protein | 9e-71 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Plim_1868 | YP_003629897.1 | Retinal dehydrogenase | VFG0082 | Protein | 1e-84 | 47 |
