Gene Information

Name : Plim_1742 (Plim_1742)
Accession : YP_003629771.1
Strain : Planctomyces limnophilus DSM 3776
Genome accession: NC_014148
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 2263322 - 2265175 bp
Length : 1854 bp
Strand : -
Note : TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC; KEGG: scl:sce4250 thiamin biosynthesis protein

DNA sequence :
ATGATCAACATCGCGCATTCGAACTCGATGGAACTTCCTCCACTGGGCAATAACCCTTCCACTCATCATGCCGGTACAAC
GCCAGGCAGCTTCGCCAACCCCCCACGAGTCGCACCAGGTGTCGAAGGTCGTTGGACTTTTTCCTCGCCCGACACACCGA
ACATGCCGCAGCCTTCTGAAAAGACGGCTTGGGATTTCCTCCCGGAGGGTTGGTCAACGGTGGAACTCGAAGAGGCAGCC
GAACTCTTCGATTACACATCGGGTGCCACGCGGGTTGTCTTTCTGCAAAGTGACGACAGCCAGCGTAAAGTCTGTTTGCC
CGCCGGCTTCGAACCCTCGACACAGCTTGAATGGGCTCGTGTGGGTGTGATCACCCCGCAGATGGTGCGAGTTGCTGAAC
GTGAAGATCATCTCATGCCTGCCCAGGTTCGTGACGAGATCGCCGCTGGCCGGTTGGTGATTCCCGCCAACAAGCACCAC
CTCAAATACCAGCTCGATCCCATGGCCATTGGCCGGGCGACGAAGACCAAGATCAATGCCAACATGGGGGCCTCCCCCGT
CTCCTCCAGCACCGACGAGGAAGTCGAAAAGCTGAAGTGGGCCGAACGCTGGGGTGCGGATACGGTGATGGATCTTTCCA
CCGGTGGCGACCTCAACGCCTGCCGCGTGGCGATCGTGCAGAACAGCACGGTCCCCATCGGGACGGTTCCCATCTATTCA
ATGATTATTGGGCGAAAGATTGAAGAGCTCTCGCACGAGATCATCCTTGAAAGTCTCGAACAACAGGCCCAACAAGGGGT
CGATTACTTCACGATCCATGCCGGTGTCTTGCGGGAACATCTTCCATTTGTGGTCAAGCGGCTCATCGGGATTGTCAGCC
GGGGTGGTTCGCTCCTCGCCCAGTGGATGATCCGCAACAGCGGCCAGAATCCGATGTACGATCGCTGGGAAGACATCTGC
GACATCATGCGCAAGCACGATGTCACCTTCTCGATCGGCGACGGCCTGCGTCCCGGCGGATTGGCCGATGCCACCGACCG
CGCTCAACTCGCCGAACTGGCGACATTGGGTGAATTGACCGAGCGCGCCTGGCGGAAGGGCGTGCAAGTCATGATCGAAG
GGCCAGGCCACGTCCCTTTCGACCAGATCGAATACAACATGAAGCTCCAGCGGACGCTCTGCCACGGTGCCCCGTTCTAT
GTCCTTGGGCCGCTGGTGACAGATATCTTCCCCGGCTATGACCATATCACCAGTTGTATTGGTGCGACTGCCGCTGCCTA
TCACGGCGCGAGCATGCTCTGCTATGTGACCCCCAAGGAGCACCTGGGCCTGCCCAAGAAAGACGACGTCAAGCAGGGCT
GCATTGCCTATAAGATTGCGGCTCATGCGGCCGATGTGGCCCTCGGCATTCCCGGCACTCGCGACCGCGACGACGAACTG
ACCAAGGCTCGCGCTGCCCTCAACTGGGAGAAGCACTTCGAGCTGAGCTTCGACCCCGATACGGCCCGTGCCTATCACGA
CGAGGACCTCGACGTCGACACCGACTTCTGCGCCATGTGTGGCCACGACTGGTGCAGCGTCCGCATCTCGAAGGAGATCG
TCGAATTTGCTTCAGGTAAGGACGAGAACTACCAGTGGAACCGCGCCAAGGTTTCTGCTGCTCTCACGCCCGAGCAGCAG
GAAATCCTCGAAAAGCGCGGTCACCTCTCCCCGCAGGAGATCCATCAACTCGCCAGCAAGACCAAAAAGGTCGTTGGTGC
CAATAAAGACGCCAAAGCGGCCTGCCACAGCGACGTGGTCGATGCAGAAAGTGCTAAGCAAATCCAGGTCGAACGACTGA
GTTCGGCAACGTGA

Protein sequence :
MINIAHSNSMELPPLGNNPSTHHAGTTPGSFANPPRVAPGVEGRWTFSSPDTPNMPQPSEKTAWDFLPEGWSTVELEEAA
ELFDYTSGATRVVFLQSDDSQRKVCLPAGFEPSTQLEWARVGVITPQMVRVAEREDHLMPAQVRDEIAAGRLVIPANKHH
LKYQLDPMAIGRATKTKINANMGASPVSSSTDEEVEKLKWAERWGADTVMDLSTGGDLNACRVAIVQNSTVPIGTVPIYS
MIIGRKIEELSHEIILESLEQQAQQGVDYFTIHAGVLREHLPFVVKRLIGIVSRGGSLLAQWMIRNSGQNPMYDRWEDIC
DIMRKHDVTFSIGDGLRPGGLADATDRAQLAELATLGELTERAWRKGVQVMIEGPGHVPFDQIEYNMKLQRTLCHGAPFY
VLGPLVTDIFPGYDHITSCIGATAAAYHGASMLCYVTPKEHLGLPKKDDVKQGCIAYKIAAHAADVALGIPGTRDRDDEL
TKARAALNWEKHFELSFDPDTARAYHDEDLDVDTDFCAMCGHDWCSVRISKEIVEFASGKDENYQWNRAKVSAALTPEQQ
EILEKRGHLSPQEIHQLASKTKKVVGANKDAKAACHSDVVDAESAKQIQVERLSSAT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 1e-97 53
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 1e-97 53