Gene Information

Name : Plim_1476 (Plim_1476)
Accession : YP_003629508.1
Strain : Planctomyces limnophilus DSM 3776
Genome accession: NC_014148
Putative virulence/resistance : Unknown
Product : cobalamin synthesis protein P47K
Function : -
COG functional category : R : General function prediction only
COG ID : COG0523
EC number : -
Position : 1901293 - 1902519 bp
Length : 1227 bp
Strand : +
Note : PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: mxa:MXAN_6524 CobW/P47K family protein

DNA sequence :
ATGACTTCAAAGCTGCCTGTTACGGTGCTTTCCGGATTTCTGGGTGCGGGGAAAACAACACTTCTGAATCATGTACTGAG
GAATCGAGAAGGGATGAAAGTCGCCGTCATCGTCAATGACATGGCGGAGATAAATGTCGATGGACAACTGATCAAAACCG
GTGGGGCCGAGCTTTCGAAAGTTGAAGAGAAGCTGGTCGAATTCTCGAATGGATGTATTTGTTGCACATTGCGAGAAGAT
CTGTTGGCTGAAGTCAGCCGCCTGGCTCGTGAAGGGCGTTTTGATTATCTGCTCGTCGAATCCACGGGAATTTCTGAGCC
GTTGCCTGTGGCTGAGACCTTTACGTTTGTCGATGAGCAGGGGGCTTCGCTCAGTGAAGTCGCCACGCTGGATACGCTGG
TGACAGTGGTCGATGCCGTCAATTTTCCCAAAGAAATAGAATCCATCGAGACTCTCGCTGAACGCCGCATGGGGCTTGGT
GATGACGATGATCGTGACGTCGCCCAATTGCTGATGGATCAGATCGAGTTCGCAAACGTGCTGATCATCAGCAAGTGCGA
TCTGGTAACAGCCGCGCAGTTGGAAGGGCTGGAATCGCTCCTGCACCAGCTCAATCCTGATGCGCGAATTGTGCGTGCCA
CACGTGGGCAGCTCCCTTTGAATGAGATCCTGAACACGCAGAGATTTTCGATGGATTGGGCCGGGCAATCGCAGGATTGG
CTGGTTGTTCCTCGGGGTGCTGAAGTTTCGGAAAGTGAAACCTATGGCTTTGACAGCGTGATTTATCGTGCCCGGCGACC
CTTTCACCCGGCTCGACTCTTCGAAGCCATACAAAGCCCGCTGTTTGACAGTATTGTGCGTTCGAAGGGAATTGTCTGGC
TGGCCACAAGGCATGATTATGCCGGGCAATGGTCGCAAGCGGGAGGAGTGTTTGCTCTCGATCCTGCCGGAACATGGTTT
GCCGCGATCGGTGGTCTCGATGATGTGGAAGATCCTGAAGAGCGAGCCGTCCTAGAGTGCCAATGGCAGGAACCTTTTGG
CGATCGCCGACAGGAGCTGGTCCTGATTGGTCAGGGGCTGTCTGAGGAGGCTGTCTCGGAACTCCTTGATGATTGCTTAC
TCACAGATGAAGAAATCGAAGCAGGAAGTTCTGTCTGGTCGGCCTGGGAAGATCCTTTCACCCCATGGAATTTTGTGGAC
CAGGATGTGACAGGCTCGGACAAGTAA

Protein sequence :
MTSKLPVTVLSGFLGAGKTTLLNHVLRNREGMKVAVIVNDMAEINVDGQLIKTGGAELSKVEEKLVEFSNGCICCTLRED
LLAEVSRLAREGRFDYLLVESTGISEPLPVAETFTFVDEQGASLSEVATLDTLVTVVDAVNFPKEIESIETLAERRMGLG
DDDDRDVAQLLMDQIEFANVLIISKCDLVTAAQLEGLESLLHQLNPDARIVRATRGQLPLNEILNTQRFSMDWAGQSQDW
LVVPRGAEVSESETYGFDSVIYRARRPFHPARLFEAIQSPLFDSIVRSKGIVWLATRHDYAGQWSQAGGVFALDPAGTWF
AAIGGLDDVEDPEERAVLECQWQEPFGDRRQELVLIGQGLSEEAVSELLDDCLLTDEEIEAGSSVWSAWEDPFTPWNFVD
QDVTGSDK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0408 YP_042534.1 cobalamin synthesis protein Not tested vSa¥á Protein 2e-74 46
SAR0450 YP_039898.1 cobalamin synthesis protein Not tested vSa¥á Protein 5e-75 46