|
Name : Plim_1183 (Plim_1183) Accession : YP_003629217.1 Strain : Planctomyces limnophilus DSM 3776 Genome accession: NC_014148 Putative virulence/resistance : Resistance Product : beta-lactamase Function : - COG functional category : R : General function prediction only COG ID : COG0491 EC number : - Position : 1514547 - 1515977 bp Length : 1431 bp Strand : - Note : PFAM: beta-lactamase domain protein; Rhodanese domain protein; SMART: rhodanese domainprotein; KEGG: bcb:BCB4264_A3523 hydroxyacylglutathione hydrolase DNA sequence : ATGCTTCTGAAATATTTTTATGACCCGGCACTCGCCCATGCTTCCTATCTCGTTGGTTGTCAGCGCACGGGTCAGGCCCT TGTGATTGATCCTGGTCGCGATGTCGATGGCTATATTGCAACGGCTCAGGAGCAGGGCCTGAAAATCGTGGGGGCGGCAG AGACACACATTCACGCCGACTTTGTTTCCGGTTCACGCGAACTAGCCGATCGAGTTGGGGCGACGCTGTATCTCTCTGAC GAAGGCCCTGCCGACTGGAAGTATCAGTACATCTCAAAACATCAGGTGCAACTGCTGCACGATGGTGATGTTTTTGGCGT CGGGAACGTGCAGCTTAAAGTGATGCACACGCCGGGCCATACCCCGGAACACATCTCCTTTGTGCTCACAGATGGTGGCA GTGGTGCTACCGAACCCATGGGAATCTTTACGGGAGACTTTGTCTTTGTGGGTTCAATTGGTCGACCGGACCTTCTCGAA ACCGCCGCTGGTGTCGTGGGAAGTGCTGAAGTCGGCGCTCGCCAACTCTTTCACTCCATCAGCAAATTCATGTCGTTACC CGACTTCCTGCAGGTCTGGCCTGCCCATGGTGCCGGAAGTGCCTGTGGCAAAGGGTTAGGAGCCATCCCATCTTCCACAG TGGGTTACGAAAAGCTCTTTAACCCGGCACTGCAGATTCGAAGTGAACAGGCCTTTGTCGATTACATTCTCGATGATCAG CCCGAAACACCTCCCTATTTCGCCGTCATGAAGCGTGTGAACAAAGTGGGCCCTCAACTGATTCGTGAACTTCCTGCGGT TTCGCGTCTGAACATTGAACAACTGGTCGATGCCCAAAGCACCAGGCTGGTCATCGACACTTCACCGGCTGCGCTCTACG CCCAGAAATCGATTCCTCAAACCATCAACATTCCGGCAACCCAGTTGGCCCAATGGAGTGGATTCTTTGTGGACGATGGC GAACCAGTTCTGCTGATCTCCAACGCAGAAGGTCTGTCTGCTCAACTGAAAGCTCTGCGATCTATCGGCGTCGACAATAT CCAGGGTTACGTCGATCGCTCCGATCTCGAACAGAATGATTTGGCAACGGCAGCCTATCGGTCGATTTCTCCGACAGAAC TCAAAGAGCTCATGGAGAATCACTCCATCGAACTGCTCGATGTCCGCTCGGCACACGAGTTCGCAGAAGAACACATTGAA GGGGCCACGCACGCATTTCTGGGTGGGCTCCGAAAGTCCTCGAAAGAGTTGTCACCAGACGAAACCTTCGTCGTGCAGTG TCAAGCCGGGGGACGTTCAGCGATTGCGGCCAGCCTCCTGAGCCGCTCTGGTCTGAAGGTGATCAATCTGGCAGGTGGCC TCAATGCCTGGAAGCGAGCCAACCTCCCGGTCGTTCATCAGAGCGTGGACCAGCACGTTGTTGGTGCCTAG Protein sequence : MLLKYFYDPALAHASYLVGCQRTGQALVIDPGRDVDGYIATAQEQGLKIVGAAETHIHADFVSGSRELADRVGATLYLSD EGPADWKYQYISKHQVQLLHDGDVFGVGNVQLKVMHTPGHTPEHISFVLTDGGSGATEPMGIFTGDFVFVGSIGRPDLLE TAAGVVGSAEVGARQLFHSISKFMSLPDFLQVWPAHGAGSACGKGLGAIPSSTVGYEKLFNPALQIRSEQAFVDYILDDQ PETPPYFAVMKRVNKVGPQLIRELPAVSRLNIEQLVDAQSTRLVIDTSPAALYAQKSIPQTINIPATQLAQWSGFFVDDG EPVLLISNAEGLSAQLKALRSIGVDNIQGYVDRSDLEQNDLATAAYRSISPTELKELMENHSIELLDVRSAHEFAEEHIE GATHAFLGGLRKSSKELSPDETFVVQCQAGGRSAIAASLLSRSGLKVINLAGGLNAWKRANLPVVHQSVDQHVVGA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SACOL0046 | YP_184956.1 | metallo-beta-lactamase | Not tested | Type-I SCCmec | Protein | 6e-74 | 43 |
| unnamed | BAA86645.1 | hypothetical protein | Not tested | Type-I SCCmec | Protein | 5e-74 | 43 |
| unnamed | BAB83478.1 | - | Not tested | SCC 12263 | Protein | 4e-74 | 43 |
