Gene Information

Name : afeB (MCR_1868)
Accession : YP_003628017.1
Strain : Moraxella catarrhalis RH4
Genome accession: NC_014147
Putative virulence/resistance : Virulence
Product : chelated iron ABC transporter ATPase subunit AfeB
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 1831235 - 1832140 bp
Length : 906 bp
Strand : +
Note : -

DNA sequence : 
ATGGATAAAATCACCATCAGCCTTGACGATATTTCGGTTCGATACAATAACGGACATACCGCTTTGTATGATGTTTCGCT
ACATCTACAAGGCGGTACAACCTGTGCCTTGGTCGGCATCAATGGTAGTGGCAAATCCACCTTATTTAAGGTGCTGATGG
GACTAATTAAACCCCAAACAGGTTATGTCAAGCTTTGTGATTTGACCATCGCTCAAGCACTTAAGAAAAATTTGGTTGCC
TATGTGCCACAAAGCGAAGAAGTTGATTGGCAATTTCCTGTATCAGTTTTAGATGTCGTCATGATGGGGCGATATGGACA
TATGAATTTTTTACGCCGACCAAAACCAAAGGATTACCAAAAGATTGATGAAGCCATGTCACGCGTCCAAATTAACCATC
TTGCCAATCGACAAATTAGCGAATTATCAGGCGGGCAAAAAAAACGGGTATTTTTGGCAAGGGCTTTGGCTCAAGAAAGT
AAAATCCTTTTATTAGATGAACCTTTCACAGGCGTTGATGTAAAAACCGAAAAAGCCATTATGAATCTTTTAGATGAATT
GCGTCAAGAAGGTCATCTCATTTTAATCTCAACACATAATTTAGGGACAGTACCTGAATTTTGTGACCAAGTTATCATGA
TAAATCGTACCATTTTAGCAATGGGAAGCACCAAAAGTACATTCACCCAAGCCAATCTTGAAAAAGTTTTTGGTGGTGTT
CTAAGGCAGCTGCACTTGGTGGGTGAAGACTTGCACGATGATGATGATAAACGCACTTTGACGATTTTGGCAGACGATGA
AATTCCTGCTGTCTTTTATGGTCATCATCAAAACCGCAGCTCTTATCATCGCAAAAATGTCAAATCCAGCGAAAATCCCC
AAGCTGAGCAAGAGGATAAGTCATGA

Protein sequence : 
MDKITISLDDISVRYNNGHTALYDVSLHLQGGTTCALVGINGSGKSTLFKVLMGLIKPQTGYVKLCDLTIAQALKKNLVA
YVPQSEEVDWQFPVSVLDVVMMGRYGHMNFLRRPKPKDYQKIDEAMSRVQINHLANRQISELSGGQKKRVFLARALAQES
KILLLDEPFTGVDVKTEKAIMNLLDELRQEGHLILISTHNLGTVPEFCDQVIMINRTILAMGSTKSTFTQANLEKVFGGV
LRQLHLVGEDLHDDDDKRTLTILADDEIPAVFYGHHQNRSSYHRKNVKSSENPQAEQEDKS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 3e-73 59
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 3e-73 59
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 2e-73 59
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 1e-73 59
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 3e-73 59

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
afeB YP_003628017.1 chelated iron ABC transporter ATPase subunit AfeB BAC0440 Protein 1e-91 64
afeB YP_003628017.1 chelated iron ABC transporter ATPase subunit AfeB BAC0350 Protein 8e-74 59
afeB YP_003628017.1 chelated iron ABC transporter ATPase subunit AfeB BAC0400 Protein 7e-44 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
afeB YP_003628017.1 chelated iron ABC transporter ATPase subunit AfeB VFG0526 Protein 8e-74 59