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Name : gabD (THI_1017) Accession : YP_003623556.1 Strain : Thiomonas sp. 3As Genome accession: NC_014145 Putative virulence/resistance : Unknown Product : Succinate-semialdehyde dehydrogenase [NADP+] (SSDH) Function : - COG functional category : - COG ID : - EC number : 1.2.1.16 Position : 1010156 - 1011649 bp Length : 1494 bp Strand : - Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 8297211, 91072256, 94127927; Product type e : enzyme DNA sequence : ATGAACCGGCCCGCCAATCCGCTGTCCCTGCTCAAAGACCCCACGCTGTTCAAGACCCAGGCCTATATCGACGGCCAGTG GATCGATTCCGCCCGCCGCTTCGCGGTCACCGACCCAGCCACCAACGCCGAACTGGCGCAGGTGCCCGCGTTGGAGCCGA TGCACGCCCAGCTCGCCATCGACGCCGCAGACGCGGCCTGGCCCGCCTGGCGCGCCCTACCGGCCAAACAGCGCGCCGCC ATCCTGCGCAAGTGGTTTGATCTGCTGGTGGCCAACGCGGACGACCTGGCCCGCCTGATGACCGCCGAACAAGGCAAGCC GCTGACCGAGGCCAAGGGCGAAGTGCTCTATGGCGCCAGCTTCGTGGAATGGTTCGCCGAAGAAGCCAAGCGCGTCTACG GCGAAACCATTCCCAGCCCCGACGCCACCAAGCGCTTGCTCGTCCTCAAGCAGCCCGTCGGCGTCTGCGCGGCGATCACG CCGTGGAATTTCCCGCTGGCCATGATCACCCGCAAGGTCGCTCCCGCGCTGGCCGCCGGTTGCCCGGTGGTCATCAAGCC CGCCGAACAGACGCCGCTGACCGCGCTGGCCGCGGCTGAACTGGCCCACCGCGCCGGCATTCCGCGCGGCGTGCTCAACG TGCTCACCGCCGACGCCGAAGGGTCGATCGCCATCGGCAAGCTGCTGTGCGCATCAAAGGTGGTGCGTCATCTGTCGTTC ACCGGCTCCACCGAGGTCGGCCGCATTCTCATGGCGCAGTCGGCGCCCAGTATCAAGAAGCTCTCGCTCGAACTCGGCGG CAACGCGCCCTTCATCGTGTTCGACGATGCCGATCTCGATTCGGCCATCGAGGGCGCCATGGCGAGCAAGTACCGCAATG CCGGCCAGACCTGCGTCTGCGCCAACCGGCTGTATGTGCAGGACGGCATCTACGACCGATTCGTCGAGCGTCTGGCGCAG GCCGTGGGCAGCCTGAAAATCGGCAGCGGCTTCGATGAAGGCGTGAATCTAGGCCCGCTGATCGACGATCAGGCGCTGGC CAAGGTCGAGAAGCACATCAGCGACGCTACCTCCAAGGGCGCGCGCATGGTGGTGGGCGGCAAGCGGGTGGAGGCCGGCC CCCATGCCGGACGGTTCTTCCAGGCCACGGTGCTGGCCGATGTGACCAGCGACATGCTCTGCGCCAGAGAGGAAACCTTC GGCCCGGTGGCGCCGGTGTTCCGCTTCAAAACCGAAGCCGAGGCCATCGCCGCGGCCAACGCCACCGAATTCGGCCTGGC CGCCTACTTCTTCAGCCGCGACGTCGGCCGCATCTTCCGCGTGGCCGAGGAACTCGAATACGGCATGGTGGGCATCAACA CCGGCTTGATGTCCAACGAAGTTGCCCCCTTCGGCGGCGTGAAACAGTCCGGCCTGGGCCGCGAAGGCTCGCATCACGGC ATCGACGAATATGTCGAAATGAAATATCTCTGCCTGGGTGATTTGAACAAGTAA Protein sequence : MNRPANPLSLLKDPTLFKTQAYIDGQWIDSARRFAVTDPATNAELAQVPALEPMHAQLAIDAADAAWPAWRALPAKQRAA ILRKWFDLLVANADDLARLMTAEQGKPLTEAKGEVLYGASFVEWFAEEAKRVYGETIPSPDATKRLLVLKQPVGVCAAIT PWNFPLAMITRKVAPALAAGCPVVIKPAEQTPLTALAAAELAHRAGIPRGVLNVLTADAEGSIAIGKLLCASKVVRHLSF TGSTEVGRILMAQSAPSIKKLSLELGGNAPFIVFDDADLDSAIEGAMASKYRNAGQTCVCANRLYVQDGIYDRFVERLAQ AVGSLKIGSGFDEGVNLGPLIDDQALAKVEKHISDATSKGARMVVGGKRVEAGPHAGRFFQATVLADVTSDMLCAREETF GPVAPVFRFKTEAEAIAAANATEFGLAAYFFSRDVGRIFRVAEELEYGMVGINTGLMSNEVAPFGGVKQSGLGREGSHHG IDEYVEMKYLCLGDLNK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 2e-132 | 62 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 5e-71 | 42 |
