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Name : hsdR2 (THI_0955) Accession : YP_003623498.1 Strain : Thiomonas sp. 3As Genome accession: NC_014145 Putative virulence/resistance : Unknown Product : Type I site-specific deoxyribonuclease HsdR Function : - COG functional category : - COG ID : - EC number : 3.1.21.3 Position : 952021 - 955122 bp Length : 3102 bp Strand : + Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 8921897; Product type e : enzyme DNA sequence : ATGAGCATCCTCAACGAAGACCACCTCGAACAAGCCACACTCCAGTGGCTCTCTGCCCTTGGCTGGCAAACCGCCCACGG CCCCGACATCTCTCCACCTGACGCCAAGACCCACGGGACCGAACGCGACACTTACCGCCAAGTCTGCCTGTCGCATCGGA TTGAGGCCGCCATTCAACGCCTCAATCCTGGCATCCCCTCCACGGCGCAAGTCGAGGCCCTCCGCCAAGTCCTGAGCCCG AACACTCCCGGCCTCATCGCCGCCAACCGCCAGTTCCACCGCTGGCTCGTCGAAGGTGTCCCAGTCGAATATCAGAAGGA CGGAGAAACCCGTGGCGACCGTGTACGGCTCATCGACTTCAGCGACGTTGGGCGAAACGACTGGCTTGCAGTCAACCAGT TTTCCATCCAGGGTCCAAAACACACCCGCCGTCCCGACGTCATCCTGTTCATCAACGGCCTGCCCCTAGTCACGCTGGAG CTCAAGAACCCCGGCGACGAGAACGCCGACATCTGGGGCGCATTCAACCAGCTCCAAGCCTACAAAGAGGATATCCCTGA CCTGTTTGTCTACAACGAGTTGCTGGTCATCACCGACGGCATTTCCGCTCGTCTGGGTTCGCTCACCGCGAACCGCGAGC GATTCATGGCCTGGCGCACGATTGATGGTCACGCCACCGACCCGCTTGGGCCCATGCGTGAGCTGGAAACCTTGGTCCAC GGGGCCTTCGACCGTAAGACGCTGCTCGATTACCTGCAGCACTTCATCCTGTTCGAGGACGATGGCGGCCTGGTCAAGAA GGTTGCCGGCTACCACCAATTCCACGCCGTGCGCGCGGTGGTCGAGAGCGTGCTGAAAGCCAGCGCCCCCGGTGGCTCAC GCAAGGGCGGGGTGGTCTGGCACACCCAGGGGGCGGGCAAAAGCATCGAGATGACCTGTCTGGGGGGCATGCTGATGCAG AACCCGCAGATGGGCAACCCAACCCTGCTGGTCGTCACCGACCGCAATGACCTGGACAACCAGTTGTTCGGCGTGTTCGC CGGCGCTACCGAGCTCCTCCATGAAACCCCGGTGCAGGCCGACACCCGCCCCCGCCTGCGAGAACTGCTGGGCAACCGCC CCAGCGGTGGCATCGTGTTCACCACCATCCAAAAGTTCGCACCAGGGGAGGACGAAGACACGTTCCCGGTGCTGTCTGAG CGCAGCAATATCGTCGTCGTTTGCGACGAAGCCCACCGCAGCCAGTACGGATTCAGCGCCGATATCAAAAAAGACGGCAA AGTCACCTATGGCTACGCGCAATATCTGCGCGATGCCTTGCCCCAGGCTACCTTTGTCGCCTTTACCGGCACGCCGGTCT CGCTCGAAGACCGCGACACCCGTGCGGTGTTCGGCGACTACGTCCACATCTATGACGTCGAGCAGGCGGTCAAGGATGGC GCCACTGTGCCCATTTACTATGAATCCCGCCTTGCCAAGCTGGAACTCAGCGAGGAGAGCTCCACGCTCCTGGACGGCGA CATCGACGAGTTGACCGAGGACGAAGAGGACGATGCCAGCAAGGCGGCCAAGCTGCGCCGCTGGGCTGCGCTGGAAAAAC TCGTTGGCGCACCGCCCCGGATTCAGAAGGTGGCCGCCGATATCGTGGAGCACTTCGAAAACCGCCTTGCCGCCCTGGAC GGTAAGGCCATGGTGGTCGGCATGAGCCGCGAGATTTGCGTCCATCTCTACGATGCCCTCGTCGCCCTGCGGCCGGAATG GCACGACCCCGACCCTGACAAGGGCGCCATCAAAATCATCATGACGGGTTCGGCCTCGGATAAACCGATGCTCAAGCCGC ACATCTACACCAAAGAGGTCAAGAAACGTCTGGAGCGGCGGTACAAAGACCCCGCCGACCCGTTCAAGTTGGTCATCGTG CGCGATATGTGGCTCACCGGCTTTGACGCGCCATGTATGCACACGATGTACATCGACAAGCCCATGCGCGGCCACAGCCT GATGCAGGCCATCGCCCGGGTGAACCGTGTGTTCAAGGACAAGCCCGGCGGCCTGGTGGTCGACTACATCGGCATTGCCA ACGAACTCAAGGCCGCCCTGAAGGACTACACCTTGGCCCATGGCAAAGGCCGGCCGACCATCGACACGCACGAGGCCCTG CGCTTGCTGCTGGAGAAGATGGAGGTCCTTCACGGCATCCTGCACGGCTGCGACTATGCGGACTTCCGCGCCCAGGCTTG GCAGTTGCTGCCCAAGGTAGCCAACCATATCCTGGGCCAGGATGATGGCAAGAAGCGCTTTGCCGATGCCGTGCTCTCCG CAAGCAAAGCCTTTGCCTTGTGCTGCACGCTCGACGAAGCTCTGGAGCATCGCGACGAGCTTGCCTTCCTGCAGGCAGTC AAGGCGGCCCTGACCAAGCACACCACCCAGGACAAGAAACTCAGCGACGAGCAGAAGGAACACGCACTCCGGCAAATTCT CAGCAAGGCCGTGGTCAGCGCCGAGGTCGTCGACATCTTCCAGGCCGCAGGGCTGAACAAGCCAGACATCGGCATTCTGT CGGACGAGTTTCTGGACGATGTGCGGCACATGAAGGAGCGCAACCTGGCGGTCGAGCTGCTTGAGCGTCTGCTCAAGGAT GACATCAAAACTCGCTTCAAGACCAATGTCGTCAAGGCGGCCAAGTACTCCGAGCTGTTGCAGGAAAGCCTCAAGCGCTA CCAAAACCGCGCGATTGAAACCGCGCAGGTCATCGAAGAACTCATCGCCATGGCCAAGCAATTCCACGAGGAGGCCATTA AAGGCGCTGCGTTGGGGCTAAGCCCTGACGAGAGGGCGTTCTACGACGCTTTGGCTGCCAATGAGTCGGCGGTGCGGGAA CTGGGCGACGAGACTCTGAAGAAGATTGCGGTCGAGTTGACGCTGAAACTGCGTAACTCGGTAACCGTGGACTGGTCGGT GAGAGATTCGGTGCGCGCCAGCCTGCGGGTGATGGTCAAGACGTTGTTACGGCGTTACAAGTATCCGCCGGATAAACAGG AAGAGGCGACTGAGACGGTGCTCCGGCAGGCAGAGATGCTGTCGGCGGAGTGGGTGGCATGA Protein sequence : MSILNEDHLEQATLQWLSALGWQTAHGPDISPPDAKTHGTERDTYRQVCLSHRIEAAIQRLNPGIPSTAQVEALRQVLSP NTPGLIAANRQFHRWLVEGVPVEYQKDGETRGDRVRLIDFSDVGRNDWLAVNQFSIQGPKHTRRPDVILFINGLPLVTLE LKNPGDENADIWGAFNQLQAYKEDIPDLFVYNELLVITDGISARLGSLTANRERFMAWRTIDGHATDPLGPMRELETLVH GAFDRKTLLDYLQHFILFEDDGGLVKKVAGYHQFHAVRAVVESVLKASAPGGSRKGGVVWHTQGAGKSIEMTCLGGMLMQ NPQMGNPTLLVVTDRNDLDNQLFGVFAGATELLHETPVQADTRPRLRELLGNRPSGGIVFTTIQKFAPGEDEDTFPVLSE RSNIVVVCDEAHRSQYGFSADIKKDGKVTYGYAQYLRDALPQATFVAFTGTPVSLEDRDTRAVFGDYVHIYDVEQAVKDG ATVPIYYESRLAKLELSEESSTLLDGDIDELTEDEEDDASKAAKLRRWAALEKLVGAPPRIQKVAADIVEHFENRLAALD GKAMVVGMSREICVHLYDALVALRPEWHDPDPDKGAIKIIMTGSASDKPMLKPHIYTKEVKKRLERRYKDPADPFKLVIV RDMWLTGFDAPCMHTMYIDKPMRGHSLMQAIARVNRVFKDKPGGLVVDYIGIANELKAALKDYTLAHGKGRPTIDTHEAL RLLLEKMEVLHGILHGCDYADFRAQAWQLLPKVANHILGQDDGKKRFADAVLSASKAFALCCTLDEALEHRDELAFLQAV KAALTKHTTQDKKLSDEQKEHALRQILSKAVVSAEVVDIFQAAGLNKPDIGILSDEFLDDVRHMKERNLAVELLERLLKD DIKTRFKTNVVKAAKYSELLQESLKRYQNRAIETAQVIEELIAMAKQFHEEAIKGAALGLSPDERAFYDALAANESAVRE LGDETLKKIAVELTLKLRNSVTVDWSVRDSVRASLRVMVKTLLRRYKYPPDKQEEATETVLRQAEMLSAEWVA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 0.0 | 58 |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 47 |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 46 |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 46 |
