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Name : hsdM1 (THI_0612) Accession : YP_003623198.1 Strain : Thiomonas sp. 3As Genome accession: NC_014145 Putative virulence/resistance : Unknown Product : type I restriction-modification (R-M) system HsdM Function : - COG functional category : - COG ID : - EC number : - Position : 614395 - 615960 bp Length : 1566 bp Strand : + Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 8921897, 8939428; Product type e : enzyme DNA sequence : ATGAACCAAGACCTCAAGAAAACGCTCTGGGCCGCCGCCGACAAGCTGCGCTCCAGCATGGACGCCGCCGAGTACAAGCA CATCGTGCTTGGGCTCATCTTCATCAAATACATCTCTGACGCATTCGACGAGCGCCGCGAGCAACTCAAAACCCAGTTCA ACGACCCCGCGTCCGACCTGTACCTGCCCGATGCGGCCGACCAGGCCGCCGCGCTGGAGGAGCGCGATTACTACACCATG GCTAATGTGTTCTGGGTGCCCGAGGTCGCGCGCTGGGAGACCCTGCGCGCCCAGGCCAAGCTCTGGGACATCGGCATCCG CATCGACCAGGCACTCGACGCCATCGAGGCCGACAACCCGCGCCTCAAGGGCATCCTGGACAAGCGCTACGGCCGCGCCC AACTGGAGCCGGGCAAGATGGGCGAGCTGGTGGACTTGGTCTCCACCATCGGCTTCGGCACGGGCACCCAGGCCAAAGAC GTCCTGGGCGAGGTGTACGAGTATTTCCTCGGCCAGTTCGCCAGCGCCGAGGGCAAGAAGGGCGGGCAGTTCTACACCCC GGCCTCGGTGGTCAAGGTGCTGGTCGAAGTGCTCGCACCGCACCAAGGCAAGGTCTACGACCCCTGCTGCGGGTCGGGTG GCATGTTCGTGCAGTCCGAGAAGTTCATCGAGAGCCACGGCGGGCGCTTTGGCGACATCTCCATCTACGGCCAGGAGGCC AACCCCACGACCTGGCGCCTAGTGGCGATGAACTTGGCCATCCGGGGCATGGACTTCAACCTCGGCAAGGAACCCGCCGA CACCTTCCACCGCGACCAGCACCCCGACCTCAAGGCCGACTACGTGCTGGCCAATCCGCCGTTCAACATCTCCGACTGGG GCGGCGACCGCCTGCTGGACGACAAGCGCTGGCTCTACGGCACGCCCAACCCGAGCAATGCGAACTACGCCTGGCTGCAG CACATCCTCTGGCACCTGAACGCCAACGGGCAGGCCGGCGTGGTGCTGGCCAACGGCAGCATGTCGTCCAACCAGAACAA CGAAGGCACCATCCGCAAGGCCATGGTCGAGGCCGACGTGGTGGAAGTCATGGTGGCGCTGCCGCCGCAACTCTTCTTCA ACACCCAGATTCCCGCCTGCCTGTGGTTCCTGACCAAGAGCAAGACCGCCCATGGCCGCGACCGCAGGGGCGAGGTGCTG TTCATCGATGCCCGCAAGCTCGGGCGCATGGAGACCCGTGTCAACCGCGTGTTCGATGACGAGGACGTGGCCAGGATTGC CGGCACGGTGCATCGCTGGCGACAGGATGGGGAGGCTGGTGCGCAAGAGCCCTATGCCGATGTGCCGGGATTCTGCCGCG CGGTGAAGCTGGCCGAGATTGCCGAACACGGCCATGTGCTCACGCCGGGGCGGTATGTGGGCGCGGAGGCGGTGGATGAT GACGATGAGGCGTTCAACGAGAAGATGGAGCGGCTGACCACCTTGCTTGCCGAGCAGATGGCGAAAGGCGCGGAGCTCGA TGCGGTGATTCGGGAGAAGCTGGGGAGGATTGGGTATGCGGTTTGA Protein sequence : MNQDLKKTLWAAADKLRSSMDAAEYKHIVLGLIFIKYISDAFDERREQLKTQFNDPASDLYLPDAADQAAALEERDYYTM ANVFWVPEVARWETLRAQAKLWDIGIRIDQALDAIEADNPRLKGILDKRYGRAQLEPGKMGELVDLVSTIGFGTGTQAKD VLGEVYEYFLGQFASAEGKKGGQFYTPASVVKVLVEVLAPHQGKVYDPCCGSGGMFVQSEKFIESHGGRFGDISIYGQEA NPTTWRLVAMNLAIRGMDFNLGKEPADTFHRDQHPDLKADYVLANPPFNISDWGGDRLLDDKRWLYGTPNPSNANYAWLQ HILWHLNANGQAGVVLANGSMSSNQNNEGTIRKAMVEADVVEVMVALPPQLFFNTQIPACLWFLTKSKTAHGRDRRGEVL FIDARKLGRMETRVNRVFDDEDVARIAGTVHRWRQDGEAGAQEPYADVPGFCRAVKLAEIAEHGHVLTPGRYVGAEAVDD DDEAFNEKMERLTTLLAEQMAKGAELDAVIREKLGRIGYAV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hsdM | BAH57701.1 | type I restriction-modification system DNA methylase | Not tested | Type-VII SCCmec | Protein | 4e-135 | 53 |
| hsdM | YP_251979.1 | type I restriction-modification system DNA methylase | Not tested | SCCmec | Protein | 3e-133 | 53 |
| hsdM | BAD24842.1 | HsdM protein | Not tested | Type-V SCCmec | Protein | 3e-133 | 52 |
| api49 | CAF28523.1 | putative HsdM-like N-methyl transferase | Not tested | YAPI | Protein | 2e-121 | 52 |
