Gene Information

Name : THI_0507 (THI_0507)
Accession : YP_003623107.1
Strain : Thiomonas sp. 3As
Genome accession: NC_014145
Putative virulence/resistance : Unknown
Product : transposase IS21 family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 514608 - 516128 bp
Length : 1521 bp
Strand : -
Note : Evidence 2b : Function of strongly homologous gene; Product type h : extrachromosomal origin

DNA sequence :
ATGGACATGATTGGCAAGATCCGGCGGATGCATTTCCGCCAGAACAAATCCGTTCGAGAGATTGCCCGCAGTACGGGGCT
GTCGCGCAACACGGTGCGTACCTGGCTACGCCAGCCGGGCGATGTCGTACCGCGGTACGCGGCGCGGCGAACACAACCCT
CGCGCAAGCTCGCGCCCTATGTGGAGTGGCTCCGGCAGGCCGTGGCCATTGATGCGCAGCGTCCTAAAGCGCAGCGGCGC
ACGGCCAGGGCATTGCATGCCGAGTTGAAGCGACAAGGCTATGACGGCGCCTACAGCCGCGTCACCGATTTACTGCGCGC
TTGGCGACAGGCCGATGGCACGAGCGCTGTGCACGCCTTCGTGCCCTTGACGTTTGCGCTGGGCGAAGCCTTCCAGTTCG
ACTGGAGTGAAGAGAGCATGGTGGTGGGCGGCGTGCCGTACCGCGTGCAGGTTGCCCACGTCAAGCTGTGCGCCAGCCGT
GCCTTCTGGCTGGGGGCCTATCCCAGCCAAGGTCACGAGATGCTGTTTGACGCCCATACCCAGGCGTTTGCCGCCTTCGG
CGGAGTGCCGCATCGCGGCATCTATGACAACATGAAGACAGCCGTCGACAAAGTGCACCCGCGCAAGAAGCGCGACGTCA
ACGCGCGCTTTGCGGCGATGTGCAGCCACTACCTGTTCGACCCCGACTTCTGCAACGTCGCTTCCGGTTGGGAGAAGGGG
GTGGTGGAGAAGAACGTCCAGGACAGCAGGCGACGTGTGTGGATTGAGGCCCTGTCGACGCCCTGGCGCTCCTTTGCCGA
ACTCAATGCCTGGCTGGCCATGCGCTGCCGTGGCTTGTGGCAGGAGATCTTCCATCCCGAGTTCAGCCAGTTCACCGTGG
CCGAGATGCTCGAGCACGAGCAGCCGCACCTCATGCCCATGCCCACAGCGTTCGACGGCTATGTGGACAACACGGTCAAG
GTCAGCAGCACCTGTCTGGTGGCCATGGCTGGCAATCGTTACTCCGTGCCCTGTGAACTCGCCGGGCGGCGGGTGAGCAC
CCGGGTGTATCCCACCGAGGTGGTCGTGGTGCATGACGGCGTGTGTGTGGCCCGCCATGCGCGGCTGGCCAACCGGGGAC
AGACCACCTACGACTGGCAGCACTATGTGCCGCTGATTCAACGCAAACCCGGGGCGTTGCGCAACGGCGCGCCGTTTGCC
GATCTGCCCCAGCCCTTGCAGCAACTGCGCCAGGCGCTGCTGCGGCAAGACGGGGGCGACCGGCTCATGGCCCAGGTGCT
GGCGCTGGTGCCCGCATCCGGGCTGGAGGCGGTCCTGGTGGCCGCTGCGCTGGTGCTGGAAGCCACGGCCCCGTCCGGGC
GCATCAGCGTGGAGCATGTGGTCAACGTGATGGGGCGCTTGCAGACCGGCCCCCAGCCCGCCCAAGTGACCACGGCCTTG
ACGATGGCCGATCCACCCCGCGCCGACACGGCCCGCTATGACCGCCTGCGGGTGACTGACGAGGAGCGAGATCATGCGTG
A

Protein sequence :
MDMIGKIRRMHFRQNKSVREIARSTGLSRNTVRTWLRQPGDVVPRYAARRTQPSRKLAPYVEWLRQAVAIDAQRPKAQRR
TARALHAELKRQGYDGAYSRVTDLLRAWRQADGTSAVHAFVPLTFALGEAFQFDWSEESMVVGGVPYRVQVAHVKLCASR
AFWLGAYPSQGHEMLFDAHTQAFAAFGGVPHRGIYDNMKTAVDKVHPRKKRDVNARFAAMCSHYLFDPDFCNVASGWEKG
VVEKNVQDSRRRVWIEALSTPWRSFAELNAWLAMRCRGLWQEIFHPEFSQFTVAEMLEHEQPHLMPMPTAFDGYVDNTVK
VSSTCLVAMAGNRYSVPCELAGRRVSTRVYPTEVVVVHDGVCVARHARLANRGQTTYDWQHYVPLIQRKPGALRNGAPFA
DLPQPLQQLRQALLRQDGGDRLMAQVLALVPASGLEAVLVAAALVLEATAPSGRISVEHVVNVMGRLQTGPQPAQVTTAL
TMADPPRADTARYDRLRVTDEERDHA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAN85144.1 unknown Not tested Hrp PAI Protein 5e-144 60
EC042_4098 YP_006098381.1 transposase Not tested Tn2411 Protein 4e-99 48
istA AAN62228.1 putative transposase Not tested PAGI-3(SG) Protein 2e-76 44