Gene Information

Name : THI_0451 (THI_0451)
Accession : YP_003623060.1
Strain : Thiomonas sp. 3As
Genome accession: NC_014145
Putative virulence/resistance : Unknown
Product : transposase of ISThsp4, IS3 family, ORFB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 460528 - 461421 bp
Length : 894 bp
Strand : -
Note : Evidence 2b : Function of strongly homologous gene; Product type e : enzyme

DNA sequence :
GTGAAGTACGCGTGGATCGACGCGCAGCGCCGCGACCATCCCCTGCCTGAGCTGTGCGAGGTGCTCGGCGTGAGCATCAG
CGGCTACCGCGCCTGGCGCCGCGGCGGCAAGCCCGATCGCGCCCGCCTGAGCGATGCGCAGGCCCTGACGCTGATGCGCA
GCATCCACGCCGAGTTCAAGGCTGCCTACGGCTCGCGGCGCATGCACCGCGAGTTGCAGGGGCGCGGCCATCGCATCGGC
CTGCGGCGGGTGGAACGACTCATGCGCGAGCACGGCATCAGGGCACGCCACAAGCGACGATTCAAGGCGACGACGGACTC
CCGGCATTCGCTGCCCATCGCGCCGAATCTGCTGGCGCGTAACTTCGCACCCGAGGCGCCGAATCGAGTCTGGACGGGGG
ATATCACGTACATCCAAACCGGCGAGGGCTGGCTGTACCTGGCCATCGTCCTCGATCTGTTCAACCGCGAGATCGTCGGC
TGGTCGATCAAACCGCGCATGACCGCGGACATCGTCACCGATGCCCTGACCATGGCGTGGTTCCGGCGCAAGCCCGAGGC
TGGAATCGTGTTTCACAGCGATCGCGGAAGTCAATACGCAAGTGCCGCCATGGCGGCCAAGCTGCGTGACTTCGGCATGA
CCGCATCGATGAGTCGCAAGGGCAACTGCTGGGACAACGCGCCGACCGAGAGCTTCTTCAACAGCCTCAAAAACGAGCGG
GTGCACGGCACGTCGTACCCGACCCGCGCCGACGCGCAGGCCGACCTGTTCCAGTACATCGAGGCGTTCTACAACCGGAG
TCGCCGCCACTCCACGCTGGGCTACCGCTCGCCGATTCGCTTCCTGGAGGAGTGGCTCAGCAAGCATGGCGATCAGCCAT
CCATGGCGGCATGA

Protein sequence :
MKYAWIDAQRRDHPLPELCEVLGVSISGYRAWRRGGKPDRARLSDAQALTLMRSIHAEFKAAYGSRRMHRELQGRGHRIG
LRRVERLMREHGIRARHKRRFKATTDSRHSLPIAPNLLARNFAPEAPNRVWTGDITYIQTGEGWLYLAIVLDLFNREIVG
WSIKPRMTADIVTDALTMAWFRRKPEAGIVFHSDRGSQYASAAMAAKLRDFGMTASMSRKGNCWDNAPTESFFNSLKNER
VHGTSYPTRADAQADLFQYIEAFYNRSRRHSTLGYRSPIRFLEEWLSKHGDQPSMAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 2e-53 47
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 9e-54 47
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 2e-53 47
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 1e-53 47
unnamed AAF09022.1 unknown Not tested SHI-O Protein 2e-53 47
unnamed AAF09030.1 unknown Not tested SHI-O Protein 1e-53 46
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 1e-53 46
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 1e-53 46
tnpB CAB61574.1 transposase B Not tested HPI Protein 5e-44 46
trp1329B CAB46576.1 IS1329 transposase B Not tested HPI Protein 3e-44 46
unnamed AAQ07468.1 TnpI-like protein Not tested Not named Protein 2e-51 45
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 2e-51 44
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 2e-51 44
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 2e-51 44
insF CAC43414.1 transposase of insertion element IS3 Not tested PAI III 536 Protein 1e-49 43
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 5e-50 42
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 5e-50 42
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 4e-50 42
RS04 AAP82949.1 putative transposase Not tested PAPI-2 Protein 3e-32 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
THI_0451 YP_003623060.1 transposase of ISThsp4, IS3 family, ORFB VFG1706 Protein 5e-54 47
THI_0451 YP_003623060.1 transposase of ISThsp4, IS3 family, ORFB VFG1631 Protein 8e-50 43