|
Name : lysU (THI_0429) Accession : YP_003623041.1 Strain : Thiomonas sp. 3As Genome accession: NC_014145 Putative virulence/resistance : Virulence Product : Lysyl-tRNA synthetase, heat inducible (Lysine--tRNA ligase) (LysRS) Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 439144 - 440673 bp Length : 1530 bp Strand : - Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10913247, 2183178, 2188953, 7735833; Product type e : enzyme DNA sequence : ATGAATACTGACGCCCCCCATCCGCCCGCCGCTGACGACAGCCACCTCATCGCGGAGCGCCGCGCCAAACTCGCCGCGTT GCGCGAGGTCGGTCCGGCGTTTCCGAATGATTTCAAGCCCACGCACCAGGCAGCCAGCCTGCAGGCGCAACTTGGGGGCG ACGAGCCCGACGCGCCCGACGCGCTCGAAGCGGCTGGCGTGCGGGTGCGGGTGGCGGGCCGCATGATGCTCAAGCGCGTG ATGGGCAAGGCCAGTTTTGCCACTTTGCAGGACGGTACGGGGCGCATTCAGATCCACGTTTCCAACGATGTCACTGGTGA AGAGGCCCATGCCGCCTTCAAACACTACGACCTGGGCGACTGGATCGGTTGCGACGGCGTGCTGTTCAAAACGCGCACCG GCGAGCTGACCATTCGGGCCGAGCAGGTGCGATTGCTGGTCAAGTCGCTGCGCCCCTTGCCCGACAAGTTTCACGGCCTC GAAGACGTGGAAACGCGCTACCGCCAGCGTTATGTCGATCTCATCGTCACACCAGAATCGCGCGAACGCTTCGCGCTGCG CAGCAAGGCCATCGCGGCGCTGCGCAACGAAATGCTGGCAGCGGGTTTCATGGAGGTTGAGACGCCCATGCTGCACCCCA TTCCCGGAGGTGCTGCGGCCAAACCGTTCATCACGCACCACAACGCGCTCGATCAGCAGATGTATCTGCGCATCGCGCCC GAGCTTTACCTCAAGCGCCTGCTGGTGGGCGGCTTCGAGCGGGTGTTCGAGATCAACCGCAATTTCCGCAACGAAGGCCT GAGCCCGCGGCACAACCCCGAGTTCACCATGATGGAGTTCTACGCCGCCTGGTGGACCTACCGCGACCAGATGGATTTCA CCGAGGCGCTGATTCGCAACACCGCGCAACTCACCTGCGGCACTGCGGTGCTCACCCACCAAGGGCGCACGCTGGACTTG AGCGCGCCGTTTGCTCGGCTGACCTTGACGCAGGCCATCCAGAAGCACGCCCCCGACTACACCGACGCGCAACTGGCCGA TGACGGCTTTTTGCGCGGCGAGTTGCGCCGTCTCGACGCCGATCACGCCCCGCACAAACTCAAGGGCATGGGACTGGGCG CTTTGCAACTCGCGCTGTTTGAGCAAGTCGCCGAGCATATGCTGTGGGAGCCGACCTTCATCGTCGATTATCCGGTGGAA GTGTCGCCCCTGGCCCGCGCCGCCGATGCCGATGCGAACACGACCGAGCGCTTCGAGCTGTTCATCACCGGCCGCGAAAT CGCCAACGGCTTCTCCGAGCTGAACGACCCCGAAGACCAGGCCGCCCGCTTTCAGTCGCAAGTGCAGGCCAAGGAAGCCG GCGACGACGAAGCCATGTATTTCGACGCCGATTATGTACGGGCACTGGAATACGGCATGCCGCCCGCCGGGGGCTGCGGC ATCGGCATCGACCGGCTGGTCATGCTGCTCACCGACGCGCCCAGCATCCGCGACGTCATTCTCTTCCCCGCCCTGCGCTT CGAAGGCTAA Protein sequence : MNTDAPHPPAADDSHLIAERRAKLAALREVGPAFPNDFKPTHQAASLQAQLGGDEPDAPDALEAAGVRVRVAGRMMLKRV MGKASFATLQDGTGRIQIHVSNDVTGEEAHAAFKHYDLGDWIGCDGVLFKTRTGELTIRAEQVRLLVKSLRPLPDKFHGL EDVETRYRQRYVDLIVTPESRERFALRSKAIAALRNEMLAAGFMEVETPMLHPIPGGAAAKPFITHHNALDQQMYLRIAP ELYLKRLLVGGFERVFEINRNFRNEGLSPRHNPEFTMMEFYAAWWTYRDQMDFTEALIRNTAQLTCGTAVLTHQGRTLDL SAPFARLTLTQAIQKHAPDYTDAQLADDGFLRGELRRLDADHAPHKLKGMGLGALQLALFEQVAEHMLWEPTFIVDYPVE VSPLARAADADANTTERFELFITGREIANGFSELNDPEDQAARFQSQVQAKEAGDDEAMYFDADYVRALEYGMPPAGGCG IGIDRLVMLLTDAPSIRDVILFPALRFEG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 1e-119 | 54 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 2e-75 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysU | YP_003623041.1 | Lysyl-tRNA synthetase, heat inducible (Lysine--tRNA ligase) (LysRS) | VFG1668 | Protein | 6e-120 | 54 |
