Gene Information

Name : pilD (THI_0417)
Accession : YP_003623030.1
Strain : Thiomonas sp. 3As
Genome accession: NC_014145
Putative virulence/resistance : Virulence
Product : Type 4 prepilin-like proteins leader peptide-processing enzyme (Protein secretion protein XCPA) (Protein pilD) [Includes: Leader peptidase (Prepilin peptidase); N-methyltransferase]
Function : -
COG functional category : -
COG ID : -
EC number : 2.1.1.-
Position : 426898 - 427767 bp
Length : 870 bp
Strand : -
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 7905475; Product type e : enzyme

DNA sequence :
ATGCCCGATTTCGGCGCGCTGCCGCTGACGTTCTGGATCGTGGCCGCCGGGCTGTTCGGCCTGGCGGTGGGCAGCTTTCT
GAACGTAGTCATCTACCGTCTGCCGGTGATGATGGAGCGACAGTGGCAGGCCGACGCCCACGCCACACTTCATCCGGACG
CTCAAACCCAGGCTGCCGAGCGCTTCGATCTCATTGCACCGCGTTCGCGCTGTCCGTCCTGCGGTCATCAGATCCTGTGG
TGGGAGAACATTCCGGTGCTCAGCTATCTGTTCCTCCGCGGGCGCTGCTCGAGTTGTCACACGACGATTTCGCCGCGCTA
TCCGCTGGTCGAACTGATCACCGCGCTGCTGACTGCGGCGGTGGTCGTGCGATGGGGTGCGAGCGGGGACAGCCTGGCCT
ACATCGTCCTGCTTTGGGCGCTGATCACCCTGGCCTTGATCGATTTCGACACCACGCTGCTGCCCGACAGCATCACCCTG
CCTCTGTTGTGGCTCGGTTTGCTGTGGCACGCCTGGCTGCACCCGGAGCAGCTTTCCAGCGCGGTGTGGGGTGCGGCTGT
CGGCTACCTCGCGCTCTGGACGGTCTACCAAGGTTTCAAGCTGTTGACCGGCAAGGAGGGCATGGGCTTTGGCGACTTCA
AGCTGCTGGCTGCACTCGGCGCCTGGTTTGGCGTTGCCGCGCTGCTGCCCATCATTTTGCTGTCCAGCATTTGCGGCGCG
GTGATCGGCATCGCCTTGCAGTTGCTCAAACTGACGGAGCGCGGCCGCCCGATTCCTTTCGGGCCCTTTCTCGCCGCCGC
CGGCATTTTGTTGCTGCTGATCGGGCCGAACACCCTGGTGGCCCTGCTGCTTCCTGCCTCCGGGGCATGA

Protein sequence :
MPDFGALPLTFWIVAAGLFGLAVGSFLNVVIYRLPVMMERQWQADAHATLHPDAQTQAAERFDLIAPRSRCPSCGHQILW
WENIPVLSYLFLRGRCSSCHTTISPRYPLVELITALLTAAVVVRWGASGDSLAYIVLLWALITLALIDFDTTLLPDSITL
PLLWLGLLWHAWLHPEQLSSAVWGAAVGYLALWTVYQGFKLLTGKEGMGFGDFKLLAALGAWFGVAALLPIILLSSICGA
VIGIALQLLKLTERGRPIPFGPFLAAAGILLLLIGPNTLVALLLPASGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAE85237.1 putative prepilin peptidase A Not tested PAI V 536 Protein 4e-19 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pilD YP_003623030.1 Type 4 prepilin-like proteins leader peptide-processing enzyme (Protein secretion protein XCPA) (Protein pilD) [Includes: Leader peptidase (Prepilin peptidase); N-methyltransferase] VFG0114 Protein 1e-41 52
pilD YP_003623030.1 Type 4 prepilin-like proteins leader peptide-processing enzyme (Protein secretion protein XCPA) (Protein pilD) [Includes: Leader peptidase (Prepilin peptidase); N-methyltransferase] VFG0234 Protein 2e-37 50
pilD YP_003623030.1 Type 4 prepilin-like proteins leader peptide-processing enzyme (Protein secretion protein XCPA) (Protein pilD) [Includes: Leader peptidase (Prepilin peptidase); N-methyltransferase] VFG1882 Protein 1e-34 44