Gene Information

Name : gspG (THI_3326)
Accession : YP_003625702.1
Strain : Thiomonas sp. 3As
Genome accession: NC_014145
Putative virulence/resistance : Virulence
Product : LspG precursor (Type II protein secretion LspG pseudopilin)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3239493 - 3239960 bp
Length : 468 bp
Strand : -
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10377156, 11254562, 1309616, 1588814; Product type t : transporter

DNA sequence : 
ATGAATGATGGTTTGAAGGAGGTTTCATCCGAGGTGCTGCGCGCGCCCGCGGCCCGTCGCAAAGCGCGCGGTTTCACGCT
GATCGAGCTCATGGTGGTGCTGGTCATCATGGGCGTGCTGGCGGCGCTCATCGTGCCCAACATCATGGGCCGCACCGACG
AGGCGCGGCAAACGGCCGCCAAGACGGATATCGCCACCATCATGCAGGCGCTCAAGTTGTACAAACTGGATAACGGCATT
TACCCCACCCAGCAGCAGGGCTTGCAGGCGTTGGTGGTCAAGCCCACCACGCCGCCGATTCCCAACAACTGGAAGCCCTA
TCTCGAAAAGCTGCCGACCGATCCGTGGGGCAATCCCTATCAATATCTCAACCCGGGCGTGAAAGGTCCGGTGGATGTGT
TCAGCTATGGCGCAGACGGCAAACCCGGCGGAGAAGGGGCAAATGCCGACATTGGCAGCTGGCAATAA

Protein sequence : 
MNDGLKEVSSEVLRAPAARRKARGFTLIELMVVLVIMGVLAALIVPNIMGRTDEARQTAAKTDIATIMQALKLYKLDNGI
YPTQQQGLQALVVKPTTPPIPNNWKPYLEKLPTDPWGNPYQYLNPGVKGPVDVFSYGADGKPGGEGANADIGSWQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 5e-32 53
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 3e-32 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gspG YP_003625702.1 LspG precursor (Type II protein secretion LspG pseudopilin) VFG1871 Protein 6e-42 62
gspG YP_003625702.1 LspG precursor (Type II protein secretion LspG pseudopilin) VFG0180 Protein 1e-40 62
gspG YP_003625702.1 LspG precursor (Type II protein secretion LspG pseudopilin) VFG2050 Protein 1e-32 53