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Name : xcpR (THI_3317) Accession : YP_003625693.1 Strain : Thiomonas sp. 3As Genome accession: NC_014145 Putative virulence/resistance : Virulence Product : General secretion pathway protein E (Type II traffic warden ATPase) Function : - COG functional category : - COG ID : - EC number : - Position : 3229704 - 3231128 bp Length : 1425 bp Strand : - Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 1588814; Product type t : transporter DNA sequence : ATGTCCGTGCGTCATCCCTTGCCCTATACCTTCTGCCGCGACCAGGCGGTGCTGGCCGAAGACGACGGCCAGGGCGTCGA ACTCTGGATGTGCGAGGCCACGCGGCCCGCGGCGCTGGCCGAGGTGCAGCGCCAGCATGTGCTGTGCGCGGTGCACCGCA CCACCGCTGAAGACCTGCAGGCGCGCATCGGCGCGGCCTACGCTGCCCGCGATGGCAGCGCCGCGTCGGTCATCAGCGAA GTGGAGGGCGACGTCGATCTGGGCCGGCTGATGCAGGACATCCCCGCGGTGGAAGACCTGCTCGAAGCCGCCGACGACGC GCCCATCATCCGCATGCTCAACGTCTTGTTCACCCAGGCCGCGCGCGAAGGGGCTTCGGACATTCACATCGAGCCCTATG AAACCGCTTCGGTGGTGCGCTTTCGCGTGGACGGCACGCTGCGCGAAGTGGTGCGGCCCAACAAGGCGCTGCATGGCGCG CTGATTTCGCGCATCAAGATTCTTTCGCAGCTCGATATCGCCGAAAAGCGTCTGCCTCAGGACGGCCGCATCGCCCTGCG CATCGGCGGCCGCACTCTCGATGTGCGCGTGTCCACCCTGCCTTGCGCGCATGGCGAACGCGCCGTGCTGCGCTTGCTCG ACAAATCGGCGGCGCGGCTGAATCTGCGCGCCGTGGGCATGGCGCCCGACATGCTCGACCACTTCGATGCCCTCATTCGC GCGCCGCACGGCATTTTGCTGGTCACCGGCCCGACCGGCAGCGGCAAGACCACCACGCTGTACTCGGCGCTGAGCCGACT CGATGCCAGCACCACCAGCATCATGACGGTGGAAGACCCGATCGAGTACGACCTGCCCGGCATCGGCCAGACGCAGGTCA ACGCCCGCATCGACCTCACCTTTGCCCGAGCTCTGCGCGCCATCCTGCGGCAAGACCCCGACGTGGTGATGATCGGCGAA ATCCGCGATTTCGAAACCGCGCAGATCGCCATTCAGGCCTCGCTCACCGGTCACCTCGTGCTCGCCACACTCCATACCAA CGACTCCGTCTCGGCCGTTACCCGCCTGACCGATATGGGCGTCGAGCCCTTTCTGCTTGCCTCTTCGCTGCTGGGCGTGT TGGCGCAGCGGCTGGTGCGCCAGCTCTGCCCGGCCTGCAAAGTGCCGTCGCCCGACGGCCAGGGTTTCGTGCCTGTGGGT TGCCCCGCGTGCAATCACACCGGCTACACCGGACGCACCGGCGTGTTCGAGCTGTTCGAAGTGGACGACGGTCTGCGCGC CGCCATTCACGCCCGTGCCTCCGAGGCCGAGTTGCGCCGCCTGGCCCAGGCCACGGGGATGCGCAATATGCGCCAGGATG GGCAACGCTATATCGACACCAGCATCACCAGTCTGGCCGAGTTGCTGCGCGTGACGCGTGATTGA Protein sequence : MSVRHPLPYTFCRDQAVLAEDDGQGVELWMCEATRPAALAEVQRQHVLCAVHRTTAEDLQARIGAAYAARDGSAASVISE VEGDVDLGRLMQDIPAVEDLLEAADDAPIIRMLNVLFTQAAREGASDIHIEPYETASVVRFRVDGTLREVVRPNKALHGA LISRIKILSQLDIAEKRLPQDGRIALRIGGRTLDVRVSTLPCAHGERAVLRLLDKSAARLNLRAVGMAPDMLDHFDALIR APHGILLVTGPTGSGKTTTLYSALSRLDASTTSIMTVEDPIEYDLPGIGQTQVNARIDLTFARALRAILRQDPDVVMIGE IRDFETAQIAIQASLTGHLVLATLHTNDSVSAVTRLTDMGVEPFLLASSLLGVLAQRLVRQLCPACKVPSPDGQGFVPVG CPACNHTGYTGRTGVFELFEVDDGLRAAIHARASEAELRRLAQATGMRNMRQDGQRYIDTSITSLAELLRVTRD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 6e-103 | 52 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 4e-103 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| xcpR | YP_003625693.1 | General secretion pathway protein E (Type II traffic warden ATPase) | VFG0182 | Protein | 9e-108 | 59 |
| xcpR | YP_003625693.1 | General secretion pathway protein E (Type II traffic warden ATPase) | VFG1876 | Protein | 1e-104 | 51 |
| xcpR | YP_003625693.1 | General secretion pathway protein E (Type II traffic warden ATPase) | VFG2048 | Protein | 1e-102 | 50 |
| xcpR | YP_003625693.1 | General secretion pathway protein E (Type II traffic warden ATPase) | VFG2426 | Protein | 2e-68 | 47 |
