Gene Information

Name : qseB (THI_3222)
Accession : YP_003625599.1
Strain : Thiomonas sp. 3As
Genome accession: NC_014145
Putative virulence/resistance : Virulence
Product : Transcriptional regulatory protein qseB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3138378 - 3139097 bp
Length : 720 bp
Strand : -
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 11929534; Product type r : regulator

DNA sequence :
ATGCGCATTCTGATTGCCGAAGATGACCGGGTCTTGGCCGACGGCCTGTTGCGCTCTCTGCGCGCTCTGGGTTATGCGGT
CGATCAGGTGGCCGACGGCAACAGCGCCGACGCCGCGCTGCAGTCCAGCGAATTCGATCTGCTGATTCTCGACCTGGGGC
TGCCGCGGCTGTCGGGCTTCGAGGTGTTGCGCAAGCTGCGCGCACGCGGCGCCACCGTGCCGGTGCTCATTCTCACCGCG
GCCGACAGTGTGGAAGACAAGGTGCGCGGCCTCGACCTCGGCGCCGACGACTACATGGCCAAGCCCTTCGCGCTGCAGGA
GCTCGAAGCCCGGGTGCGAGCCCTGTCGCGCCGGGGCATGGGCGGCGCCAGCGCCGTCATCCAGCACGGCCCGCTGCACT
ACGACATCACTGGCCGCGTGGTCACGCTCGACGGTCATGTGGTGGAACTCTCGGCGCGCGAACTCACCCTGCTCGAAGTG
CTGCTGCAGCGCGCCGGGCGGCTGGTGAGCAAGGACCAGCTCGTCGAGCATCTGTGCGTTTGGGGTGAGGAGGTGAGCAC
CAACGCCATCGAGGTGTATGTGCACCGGCTGCGGAAAAAGATCGAAGTCGGCCCGGTGCGCATCGCCACGGTGCGCGGTC
TGGGCTACTGTCTGGAGAAAATCGTCCCGGTTGCCGCGACTTCGGCCGAGTCGGCCGCGCCTCCTCGTGCCGATGCCTGA

Protein sequence :
MRILIAEDDRVLADGLLRSLRALGYAVDQVADGNSADAALQSSEFDLLILDLGLPRLSGFEVLRKLRARGATVPVLILTA
ADSVEDKVRGLDLGADDYMAKPFALQELEARVRALSRRGMGGASAVIQHGPLHYDITGRVVTLDGHVVELSARELTLLEV
LLQRAGRLVSKDQLVEHLCVWGEEVSTNAIEVYVHRLRKKIEVGPVRIATVRGLGYCLEKIVPVAATSAESAAPPRADA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 1e-32 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
qseB YP_003625599.1 Transcriptional regulatory protein qseB BAC0638 Protein 7e-26 46
qseB YP_003625599.1 Transcriptional regulatory protein qseB BAC0487 Protein 4e-32 46
qseB YP_003625599.1 Transcriptional regulatory protein qseB BAC0083 Protein 2e-32 46
qseB YP_003625599.1 Transcriptional regulatory protein qseB BAC0308 Protein 2e-29 44
qseB YP_003625599.1 Transcriptional regulatory protein qseB NC_002516.2.879194.p Protein 1e-27 43
qseB YP_003625599.1 Transcriptional regulatory protein qseB BAC0197 Protein 2e-30 42
qseB YP_003625599.1 Transcriptional regulatory protein qseB CP001918.1.gene2526. Protein 4e-27 41
qseB YP_003625599.1 Transcriptional regulatory protein qseB CP000647.1.gene1136. Protein 4e-26 41
qseB YP_003625599.1 Transcriptional regulatory protein qseB CP001138.1.gene1939. Protein 1e-25 41
qseB YP_003625599.1 Transcriptional regulatory protein qseB BAC0347 Protein 1e-29 41
qseB YP_003625599.1 Transcriptional regulatory protein qseB BAC0530 Protein 4e-26 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
qseB YP_003625599.1 Transcriptional regulatory protein qseB VFG1390 Protein 2e-29 44
qseB YP_003625599.1 Transcriptional regulatory protein qseB VFG0473 Protein 1e-34 44
qseB YP_003625599.1 Transcriptional regulatory protein qseB VFG1389 Protein 2e-25 42
qseB YP_003625599.1 Transcriptional regulatory protein qseB VFG0475 Protein 1e-25 41