Gene Information

Name : istA (THI_3067)
Accession : YP_003625458.1
Strain : Thiomonas sp. 3As
Genome accession: NC_014145
Putative virulence/resistance : Unknown
Product : transposase of ISThsp19, IS21 family, ORFA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3001007 - 3002539 bp
Length : 1533 bp
Strand : +
Note : Evidence 2b : Function of strongly homologous gene; Product type e : enzyme

DNA sequence :
ATGGACATGATTGGCAGGATCCGGCATTTGCATGCCCGGAAGAACAAATCGGAGCGCGAGATTGCGCGCATGACAGGGCT
CTCGCGCAACACGGTTGCGAAGTGGTTGCACGGCGAGGTGGACGGCCCACCGAAGTACCGGCGCGGAGAGCAGCCCAACA
AGCTCACGGCGTTCCACGACGCGCTCAGGCAAGCGTTGAAGGCCGACGCGCGGCGGCCCAAACACGAGCGGCGCACGGCC
AAAGCGCTGTACGCCGAGATCAGGCGCGCGGGCTATGAGGGTGGCTACACGCGGGTGACCGACTTCATCCGGGCGTGGCG
CCAGGGCGAAGGCCAGGGGTCTGCGGTCAACGCTTTTGTGCCGCTGGCCTTCGAGCTGGGCGAAGCCTTCCAGTTCGACT
GGAGCGAGGAAGGCATGGTGATTGGCGGCATCTACTACCGGGTGCAGGTCTCCCACATGAAGCTGTGCGCCAGTCGGGCC
TTCTGGCTGGTGGCCTACCCCAGCCAGGGCCACGAGATGCTGTTCGATGCCCACACCCGGTCGTTCGCGGCGCTCGGCGG
CGTGGCGCGCCGGGGCATCTATGACAACATGAAGACGGCCGTTGACAAGGTCAAGAAAGGCAAGGGACGCATCGTCAACG
AGCGCTTTGCCACCATGTGCGCGCACTACCTGTACGACCCGGACTTCTGCAACGTGGCCAGTGGCTGGGAGAAAGGGGTG
GTGGAGAAGAACGTGCAGGACAGCCGTCGGCGCATCTGGATCGACGCGGCCAAGATCAAGTTCGGCAGCTTCAGCGAACT
CAACGCCTGGCTGGGCCAGCGCTGCCGCGCGTTGTGGGACGAGGTGCGCCACCCCGAGCACACCCAGTTCAGCGTGGCCG
AGATGCTCGAACACGAGCGCGCGCGCCTCATGCCCATGCCGGTGCCGTTCGATGGCTACGTCGAGAAACCCGCGCGGGTC
TCCAGCACCTGTCTGGTGTCGGTGGCGCGCAACCGCTATTCGGTGCCGTGCGAACGGGTGGGGCAGATAGTCAGCACACG
GCTGTACCCGGGCAGCGTCGCCATCGTGGTCGACGACACCATCGTGGCCCGCCACGACCGGCTCAGCAACGCGGGGGAGA
CCCGGTACGACTGGCAGCACTACATCCCGCTGCTGCAGAGGAAGCCTGGCGCGCTGAGGAACGGCGCGCCTTTTGCCGAC
ATGCCCGAGCCGCTGCAGCGACTGCGCCGTGGGCTGCTGCGCAACCCAGGCGGCGACCGGGTCATGGCGCAGGTGCTGGC
GATCGTGCTCAGCGCCGGTCTGGATGCGGTGCTGGTGGCCATCGAACTGGCGCTGGAGAGCGGTCCACCGGGCAAGGTCA
GTGTGGAGCATGTGGTCAATGTGCTGAGCCGACTCAACGCGCAGCCGGTGCCGCCCACGGCGGCTACGCTGCTGAGAGTG
AACACGCCGCCGCTGGTGAACACGGCGCGCTACGACAGCCTGCGCTCGGACGCCGCGGGCGCCATCACCGAGGGAGCCGG
CCATGAAGACTGA

Protein sequence :
MDMIGRIRHLHARKNKSEREIARMTGLSRNTVAKWLHGEVDGPPKYRRGEQPNKLTAFHDALRQALKADARRPKHERRTA
KALYAEIRRAGYEGGYTRVTDFIRAWRQGEGQGSAVNAFVPLAFELGEAFQFDWSEEGMVIGGIYYRVQVSHMKLCASRA
FWLVAYPSQGHEMLFDAHTRSFAALGGVARRGIYDNMKTAVDKVKKGKGRIVNERFATMCAHYLYDPDFCNVASGWEKGV
VEKNVQDSRRRIWIDAAKIKFGSFSELNAWLGQRCRALWDEVRHPEHTQFSVAEMLEHERARLMPMPVPFDGYVEKPARV
SSTCLVSVARNRYSVPCERVGQIVSTRLYPGSVAIVVDDTIVARHDRLSNAGETRYDWQHYIPLLQRKPGALRNGAPFAD
MPEPLQRLRRGLLRNPGGDRVMAQVLAIVLSAGLDAVLVAIELALESGPPGKVSVEHVVNVLSRLNAQPVPPTAATLLRV
NTPPLVNTARYDSLRSDAAGAITEGAGHED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAN85144.1 unknown Not tested Hrp PAI Protein 1e-164 64
EC042_4098 YP_006098381.1 transposase Not tested Tn2411 Protein 7e-109 48
istA AAN62228.1 putative transposase Not tested PAGI-3(SG) Protein 3e-90 43