Gene Information

Name : emrE (THI_0030)
Accession : YP_003622665.1
Strain : Thiomonas sp. 3As
Genome accession: NC_014145
Putative virulence/resistance : Resistance
Product : Multidrug transporter emrE (Efflux-multidrug resistance protein emrE) (Methyl viologen resistance protein C) (Ethidium resistance protein)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 34219 - 34551 bp
Length : 333 bp
Strand : +
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10383465, 14633977, 14755055, 15044024, 15111102, 15175281, 92319648; Product type t : transporter

DNA sequence :
ATGCAATCCTGGTTATTTCTGTTCGGCGCGATAGCGGCCGAGGTGATCGGCACCACCGCGCTCAAGGCCACGCACGGCTT
CACGCGTCTGGCCCCTTCAGTGGTGGTCGTGGCGGCTTACGCCCTGGCGTTTTACCTGCTGTCACGCACCATGCAGACCA
TTCCGATGAGCATTTCCTATGCCGTCTGGTCGGGCGTGGGCATCGTGCTCATCACCCTGATCGGCTATGTGGTTTATCAC
CAGTCGCTCGACTTGCCCGCGCTCGTCGGGCTGGGGCTGATTCTCGCCGGTGTGCTGGTCATCCACCTGTTCTCCAAATC
GGTGGCGCATTAA

Protein sequence :
MQSWLFLFGAIAAEVIGTTALKATHGFTRLAPSVVVVAAYALAFYLLSRTMQTIPMSISYAVWSGVGIVLITLIGYVVYH
QSLDLPALVGLGLILAGVLVIHLFSKSVAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
qacEdelta1 AGK07074.1 QacEdelta1 Not tested SGI1 Protein 3e-08 53
qacE-delta1 AFG30112.1 QacE-delta1 Not tested PAGI-2 Protein 3e-08 53
qacEdelta1 CAJ77030.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 3e-08 53
qacEdelta1 YP_005797150.1 quaternary ammonium compound-resistance protein Not tested AbaR4e Protein 4e-08 53
qacEdelta1 AGK07100.1 QacEdelta1 Not tested SGI1 Protein 3e-08 53
qacEdelta1 AGF34989.1 QacEdelta1 Not tested SGI1 Protein 3e-08 53
qacEdelta1 CAJ77049.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 3e-08 53
ebr YP_006098377.1 putative ethidium bromide resistance protein Not tested Tn2411 Protein 4e-08 53
qacEdelta1 AGK07109.1 QacEdelta1 Not tested SGI1 Protein 3e-08 53
qacEdelta1 AGF35028.1 QacEdelta1 Not tested SGI1 Protein 3e-08 53
qacEdelta1 CAJ77052.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 3e-08 53
qacEdelta1 ACN81026.1 QacEdelta1 Not tested AbaR5 Protein 4e-08 53
qacEdelta1 AFV53123.1 QacEdelta1 multidrug exporter Not tested AbGRI2-1 Protein 3e-08 53
qacEdelta1 AGF35063.1 QacEdelta1 Not tested SGI1 Protein 3e-08 53
qacEdelta1 CAJ77088.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 3e-08 53
qacEdelta1 AGK36647.1 QacEdelta1 Not tested AbaR26 Protein 3e-08 53
qacEdelta1 AGK06933.1 QacEdelta1 Not tested SGI1 Protein 3e-08 53
qacE-deltal ACF06159.1 quartenary ammonium compound resistance protein Not tested Tn5036-like Protein 3e-08 53
qacEdelta1 AAK02047.1 quaternary ammonium compound and disinfectant protein Not tested SGI1 Protein 3e-08 53
qacEdelta1 AGK06970.1 QacEdelta1 Not tested SGI1 Protein 3e-08 53
qacE-delta1 ACY75523.1 QacE-delta1 Not tested Tn6060 Protein 3e-08 53
qacEdelta1 AAK02056.1 quaternary ammonium compound and disinfectant protein Not tested SGI1 Protein 3e-08 53
qacEdelta1 AGK06979.1 QacEdelta1 Not tested SGI1 Protein 3e-08 53
qacE-delta1 ACY75532.1 QacE-delta1 Not tested Tn6060 Protein 3e-08 53
qacEdelta1 ABB48428.1 QacEdelta1 Not tested SGI1 Protein 3e-08 53
ACICU_00227 YP_001844886.1 membrane transporter Not tested AbaR20 Protein 4e-08 53
qacEdelta1 AGK07016.1 QacEdelta1 Not tested SGI1 Protein 3e-08 53
qacE-delta1 AET25389.1 QacE-delta1 Not tested PAGI-2(C) Protein 3e-08 53
qacEdelta1 ABZ01839.1 QacEdelta1 Not tested SGI2 Protein 3e-08 53
qacEdelta1 YP_005797134.1 quaternary ammonium compound-resistance protein Not tested AbaR4e Protein 4e-08 53
unnamed CAD42067.1 hypothetical protein Not tested PAI II 536 Protein 1e-05 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
emrE YP_003622665.1 Multidrug transporter emrE (Efflux-multidrug resistance protein emrE) (Methyl viologen resistance protein C) (Ethidium resistance protein) NC_010410.6003348.p0 Protein 6e-08 59
emrE YP_003622665.1 Multidrug transporter emrE (Efflux-multidrug resistance protein emrE) (Methyl viologen resistance protein C) (Ethidium resistance protein) BAC0002 Protein 6e-08 59
emrE YP_003622665.1 Multidrug transporter emrE (Efflux-multidrug resistance protein emrE) (Methyl viologen resistance protein C) (Ethidium resistance protein) BAC0324 Protein 6e-09 58
emrE YP_003622665.1 Multidrug transporter emrE (Efflux-multidrug resistance protein emrE) (Methyl viologen resistance protein C) (Ethidium resistance protein) CP001138.1.gene1489. Protein 4e-08 57
emrE YP_003622665.1 Multidrug transporter emrE (Efflux-multidrug resistance protein emrE) (Methyl viologen resistance protein C) (Ethidium resistance protein) BAC0322 Protein 9e-09 53
emrE YP_003622665.1 Multidrug transporter emrE (Efflux-multidrug resistance protein emrE) (Methyl viologen resistance protein C) (Ethidium resistance protein) BAC0323 Protein 1e-08 53
emrE YP_003622665.1 Multidrug transporter emrE (Efflux-multidrug resistance protein emrE) (Methyl viologen resistance protein C) (Ethidium resistance protein) NC_002695.1.913273.p Protein 2e-06 52
emrE YP_003622665.1 Multidrug transporter emrE (Efflux-multidrug resistance protein emrE) (Methyl viologen resistance protein C) (Ethidium resistance protein) BAC0150 Protein 2e-06 52
emrE YP_003622665.1 Multidrug transporter emrE (Efflux-multidrug resistance protein emrE) (Methyl viologen resistance protein C) (Ethidium resistance protein) BAC0377 Protein 1e-06 52
emrE YP_003622665.1 Multidrug transporter emrE (Efflux-multidrug resistance protein emrE) (Methyl viologen resistance protein C) (Ethidium resistance protein) CP004022.1.gene1549. Protein 6e-07 48
emrE YP_003622665.1 Multidrug transporter emrE (Efflux-multidrug resistance protein emrE) (Methyl viologen resistance protein C) (Ethidium resistance protein) BAC0325 Protein 3e-07 43
emrE YP_003622665.1 Multidrug transporter emrE (Efflux-multidrug resistance protein emrE) (Methyl viologen resistance protein C) (Ethidium resistance protein) BAC0327 Protein 3e-06 43
emrE YP_003622665.1 Multidrug transporter emrE (Efflux-multidrug resistance protein emrE) (Methyl viologen resistance protein C) (Ethidium resistance protein) BAC0378 Protein 8e-05 42
emrE YP_003622665.1 Multidrug transporter emrE (Efflux-multidrug resistance protein emrE) (Methyl viologen resistance protein C) (Ethidium resistance protein) BAC0329 Protein 1e-08 42
emrE YP_003622665.1 Multidrug transporter emrE (Efflux-multidrug resistance protein emrE) (Methyl viologen resistance protein C) (Ethidium resistance protein) BAC0140 Protein 2e-05 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
emrE YP_003622665.1 Multidrug transporter emrE (Efflux-multidrug resistance protein emrE) (Methyl viologen resistance protein C) (Ethidium resistance protein) VFG1586 Protein 5e-06 45