Gene Information

Name : THI_2883 (THI_2883)
Accession : YP_003625291.1
Strain : Thiomonas sp. 3As
Genome accession: NC_014145
Putative virulence/resistance : Unknown
Product : transposase of ISThsp3, IS66 family, ORFC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2823744 - 2825303 bp
Length : 1560 bp
Strand : +
Note : Evidence 2b : Function of strongly homologous gene; Product type e : enzyme

DNA sequence : 
ATGGTCAGCGCCATCGACGACGACAAACTCCAGTCCCTGGGCGACGATCCGGCGGCGCAGTACGCGCGCACGGTCATTGC
GCAGTTCGGTGCACAGATCGCGCACCAGCGTGCCGAGCTCAAATTTCAATCGACCAAGATTGCGGCCCTGAGCTTCGAGC
TGGCGCGCCTCAAGCAATGGCGCTTCGGCCAGTCCAGCGAGAGCCTGGACACGCAAGGCCAGCTCTTCGACGCCAAGACG
CAGGCGCTGCTGCAAGCCGAGGAACAGGCCGAGGACCGCGCCGCCGATGAGGAGCGCACCGCCCCAGGCAAACGTCTCCC
CAAACGCCAGCCCCTGCCCAGCCAGTTGCCGCGCATCGAACACCGCTACGAGATCGACTCCGGCCTGTGCCCGCAGGGCC
ACGCCCTGCGCCGTATCGGGCAGGAGATCAGCGAGCAGCTCGACTGCGAGCCCACACGCTTCTTCGTGCACCGGCACGTC
CGCGGCAAGTACGCCTGTGCGTGCTGCCAGACGGTGTTGGCTGCACCCCTGCCAGCGCAACTCATTGACAAAGGCATTCC
CGCCCCCGGCCTGCTGGCGCAGGTGGTGCTGGCCAAGCACGACGATCACCTGCCGTTGTACCGCCAGGAGGAGATTTACC
GCCGCAGCGGCGTGCACCTCCCGCGCTCGAGCATGGCGCAGTGGGTGGGCCTGTGCGGCGTGCGCCTGGAACCGCTGGCC
CAGGCCCTCAAAGACCATCTGCTGGAGCAACCCGTGCTGCATGCCGATGAGACCCCGGTAGCCGAGCTCGCTCCGGGCAC
GGGCAAGACCCACCGCGCCTATGTCTGGGTGTACCGCAGCGCGGCTACGCCGGCCGTGGTGTTTGACTATTGCGCCAGTC
GTGCCGGTGCGCATGCGCGCGACTTTCTGCAGGACTGGTCAGGCACCTTGCTCACCGATGACTTCAGCGGTTATAAGGCG
CTGTATGCCCAAGGGAGCGTTGTGGAGGCGGGTTGCTGGGCGCATGTACGCAGAAAGTTCTTCGAGGCGCACAAGCTGGC
GGGCAGCGCGATTGCGCAGGAGGCGCTTAAGCGCATCAAAGCCTTGTATGCCATTGAGCAGACCCTTCAGGAGCATCCGC
CCGATGGGCGCACCGCGCTGCGCCAGCGCCAAAGCCAACCCCTGCTCGATGCCTTGCACGCCTGGCTGATCGGGCAGCGC
TCGCTCTTGGCCAAGGCCGACGCCACGGCGCGGGCCATCGACTATGCGCTGGGCCGGTGGCGGGCGTTGTGTGTGTTTGC
CACCGATGGGCGCGTGCCGATCGATAACAACGCGGTGGAAAACGCGATTCGGCCTCTCGCCCTGGGCCGTAAGAATTGGC
TCTTCGTGGGCTCGCCCCAGGCCGGCCGCCGAGCCGCCGTGCTCATGACGCTGATCGAATCGGCCAAGCTGTGCGAGGTC
GACCCCTGGGCCTATCTCAAGGATGTGCTGACGAAGCTGCCCACCTGGCCCAACAGCCGTCTGGGCGAATTGCTGCCGCA
CAACTGGGCGAATACCAATCCCCCTGCACTCAGCACCTGA

Protein sequence : 
MVSAIDDDKLQSLGDDPAAQYARTVIAQFGAQIAHQRAELKFQSTKIAALSFELARLKQWRFGQSSESLDTQGQLFDAKT
QALLQAEEQAEDRAADEERTAPGKRLPKRQPLPSQLPRIEHRYEIDSGLCPQGHALRRIGQEISEQLDCEPTRFFVHRHV
RGKYACACCQTVLAAPLPAQLIDKGIPAPGLLAQVVLAKHDDHLPLYRQEEIYRRSGVHLPRSSMAQWVGLCGVRLEPLA
QALKDHLLEQPVLHADETPVAELAPGTGKTHRAYVWVYRSAATPAVVFDYCASRAGAHARDFLQDWSGTLLTDDFSGYKA
LYAQGSVVEAGCWAHVRRKFFEAHKLAGSAIAQEALKRIKALYAIEQTLQEHPPDGRTALRQRQSQPLLDALHAWLIGQR
SLLAKADATARAIDYALGRWRALCVFATDGRVPIDNNAVENAIRPLALGRKNWLFVGSPQAGRRAAVLMTLIESAKLCEV
DPWAYLKDVLTKLPTWPNSRLGELLPHNWANTNPPALST

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
RL059 AAP84184.1 transposase Not tested PAPI-1 Protein 2e-108 49
tnpC AEZ06051.1 transposase Not tested Tn6167 Protein 3e-96 45
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 3e-80 44
Z4317 NP_289543.1 hypothetical protein Not tested OI-122 Protein 8e-67 42
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 5e-82 41
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 2e-81 41
unnamed AAC31494.1 L0015 Not tested LEE Protein 3e-82 41
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 2e-81 41
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 6e-82 41
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 3e-82 41
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 4e-82 41
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 4e-82 41
tnp AEA34686.1 transposase Not tested Not named Protein 5e-82 41
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 3e-82 41
unnamed AAL57570.1 unknown Not tested LEE Protein 2e-82 41
Z4340 NP_289564.1 hypothetical protein Not tested OI-122 Protein 2e-76 41
ECO103_3554 YP_003223421.1 hypothetical protein Not tested LEE Protein 2e-66 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
THI_2883 YP_003625291.1 transposase of ISThsp3, IS66 family, ORFC VFG0793 Protein 2e-82 41