Gene Information

Name : qseB (THI_2276)
Accession : YP_003624733.1
Strain : Thiomonas sp. 3As
Genome accession: NC_014145
Putative virulence/resistance : Virulence
Product : Transcriptional regulatory protein qseB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2231498 - 2232175 bp
Length : 678 bp
Strand : +
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 11929534; Product type r : regulator

DNA sequence : 
ATGCGCATTCTCCTGGTTGAAGACGATCACATGCTGGGCGCCGCCACGCGCGAAGCCCTGCGCGACGCCACCCACGCGGT
GGACTGGGTACTCGACGGCGCGTCGGCGCTGAGCGCGGCGCAAGGCGGCGAATACGAGCTGATGCTGCTCGATCTCGGCC
TGCCCAAGCGCGACGGTCTGTCGGTGCTGCAGGCGCTGCGGCAGTCAGGCAGCAACCTGCCCATCCTCATCCTCGCTGCG
CGCGACGCGCTCGAAGACCGGGTGCGCGGCCTCGACCTGGGCGCAGACGACTATCTGGTCAAACCCTTCGAGAGCGCCGA
GCTGCTGGCGCGCATCCGCGCCGTGGCGCGGCGCCAGGGCGGGCAGGCGCAGCCTGTGCTGTCCAACGGTGTGCTCGAAC
TCGACCCCGTTTCCCGCGAGGTGCGGTTTCAGGGGCAGACGCAGCGTCTGACCGCGCGCGAATACGCCCTGCTCCACGCG
CTATTGCTGCGCCCCGGCGCCATTCTGTCGCGCAGCGAACTCGAAGACCGCATCTACGGCTGGAACGAAGAGGTGGAAAG
CAACGCGGTGGAGTTTCTCATCCACAGCCTGCGCAAAAAACTCGCGCCGGATGTCATCAAAAACGTGCGCGGGGTGGGCT
GGCTGGCGCCGCGCGGCGATACGGACAAGGCGCCATGA

Protein sequence : 
MRILLVEDDHMLGAATREALRDATHAVDWVLDGASALSAAQGGEYELMLLDLGLPKRDGLSVLQALRQSGSNLPILILAA
RDALEDRVRGLDLGADDYLVKPFESAELLARIRAVARRQGGQAQPVLSNGVLELDPVSREVRFQGQTQRLTAREYALLHA
LLLRPGAILSRSELEDRIYGWNEEVESNAVEFLIHSLRKKLAPDVIKNVRGVGWLAPRGDTDKAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 2e-35 44
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 8e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
qseB YP_003624733.1 Transcriptional regulatory protein qseB BAC0197 Protein 6e-37 44
qseB YP_003624733.1 Transcriptional regulatory protein qseB BAC0288 Protein 2e-26 41
qseB YP_003624733.1 Transcriptional regulatory protein qseB U82965.2.orf14.gene. Protein 1e-29 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
qseB YP_003624733.1 Transcriptional regulatory protein qseB VFG0473 Protein 1e-39 46
qseB YP_003624733.1 Transcriptional regulatory protein qseB VFG0596 Protein 3e-28 41