Gene Information

Name : kdsB (THI_2096)
Accession : YP_003624566.1
Strain : Thiomonas sp. 3As
Genome accession: NC_014145
Putative virulence/resistance : Virulence
Product : 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) (CMP-2-keto-3-deoxyoctulosonic acid synthetase) (CKS)
Function : -
COG functional category : -
COG ID : -
EC number : 2.7.7.38
Position : 2048186 - 2048965 bp
Length : 780 bp
Strand : -
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 3023327, 89193678; Product type e : enzyme

DNA sequence : 
ATGGCGGCTGCGTTCTGGGTGCTCATACCGGCCCGGCTGGCTTCCACGCGCCTGCCCAACAAGCCCCTGGCGGACATTGC
CGGGGCGCCGATGGTGGTGCGCGTGGCGCAGCGCGTGGCGCATAGCGGCGCGCAGGAAGTGGTGGTGGCCTGTGACAGTC
CGTTGATTGCGCAGGCCTGTGCGGCGCACGGCGTTCGCGCCGTTCTCACCCGCGAAGATCACGCCAGCGGCACCGACCGG
CTGGCCGAGGCCGCCGAGTCGCTGGGTCTGCCCGAAGACGCCATCTTGGTCAATGTGCAGGGCGACGAGCCGCTGATCGA
CCCCAAGTTGCCCGCGGCCTGCGCGGCCTTGCTGCAGCGCACTCCGCAAATCCCGATGGCCACCTGCGCGCATGCCATCA
CCGAAGCGGCCGAGATTTTTAACCCGAATGTGGTGAAAGTCGTGCTCGATGCGCAGGGCAGGGCCCTGTATTTCTCGCGC
GCGCCGATTCCGTGGCAGCGCGACGCCTACACGGCGGGTTCAGGCGGCTGGGCGATGCCGGGGCAGCCCCCGCATCCGGT
CTATCGTCACATCGGGTTGTACGCCTATCGCCACCGTTTTCTGCGCGATTACGCCAAGCTGGCCCCGGCGCCGCTGGAAC
AGGCCGAAGCGCTGGAGCAATTGCGCGTACTCTGGCACGGGCACTCCATTGCGGTGCATGTGACCGAACAGGCGCCCGGC
CCCGGCGTCGACACGCTGGCCGATCTGGAGCGCGTGCGGGCGATGTGGCTTGAGCGCTGA

Protein sequence : 
MAAAFWVLIPARLASTRLPNKPLADIAGAPMVVRVAQRVAHSGAQEVVVACDSPLIAQACAAHGVRAVLTREDHASGTDR
LAEAAESLGLPEDAILVNVQGDEPLIDPKLPAACAALLQRTPQIPMATCAHAITEAAEIFNPNVVKVVLDAQGRALYFSR
APIPWQRDAYTAGSGGWAMPGQPPHPVYRHIGLYAYRHRFLRDYAKLAPAPLEQAEALEQLRVLWHGHSIAVHVTEQAPG
PGVDTLADLERVRAMWLER

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsU CAE85213.1 KpsU protein Virulence PAI V 536 Protein 1e-29 44
kpsU YP_854332.1 3-deoxy-manno-octulosonate cytidylyltransferase Not tested PAI I APEC-O1 Protein 1e-28 43
kpsU AAZ04469.1 CMP-KDO synthetase Virulence PAI I APEC-O1 Protein 7e-29 43