Gene Information

Name : xerD (THI_1892)
Accession : YP_003624382.1
Strain : Thiomonas sp. 3As
Genome accession: NC_014145
Putative virulence/resistance : Unknown
Product : Tyrosine recombinase xerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1869523 - 1870476 bp
Length : 954 bp
Strand : -
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10361305, 20209354, 94006566, 94100681, 94222031, 9632255; Product type e : enzyme

DNA sequence : 
ATGCCTGAAGCCCCGCTTTACCTCGAATGGCCGCCCGCGCCCGAAGCCTGCGCCACCACGATCGACCGTTTCTGCGACGC
CCTCTGGCTGGAAGACGGCCTCTCGCCCAACACCCTCGCCGCTTACCGCCGCGACCTCACGCTGATGGCGCGCTGGCTGG
CCTTTTCGCAGCGCCAGCCCTTGATCGAGGCGACGCTGCGCGATGTGCAGGCGTATATCGCCGCCCGTTTCATGCAAAGC
AAAGCCACCTCGTCCAACCGGCGGCTGGTGGTGCTGCGCCGCTTTTACCGCTGGGCCTTGCGTGAGCACTTGCGCACCGA
CGACCCCACGCTGCAGCTCGACACCGCGCGTCAGCCGCCGCGCCGCCCCAAGACCCTGAGCGAAGCGCAGGTGGAAGCGC
TGCTCGCCGCACCCGAGGTGGACACGCCGCTGGGCCTGCGCGACCGCGCCATGCTCGAACTGCTCTACGCCAGTGGCCTG
CGGGTGAGTGAACTGGTGGCGCTGCCAGTGGTGCGCGTGTCGCTCGATCAGGGCGTGGTGCAGATTGCGGGCAAAGGCGG
CAAAGAGCGACTCGTGCCGTTCGGCAGCGCCGCGCAAGACTGGCTGCAGAACTACCTGCGCACTGCGCGCCATGAGTTGC
TGCAGGGGCGCGACAGCCCCTTTCTGTTCGTCACCGCGCGCAGCGGGCAAAGCGCCCGCGAAACCACCGGCATGACGCGG
CAGATGTTCTGGATGCGCATCAAGGCCTATGCGCGCAAGGCCGGTATCGACGTACCGCTGTCGCCCCACACCCTGCGCCA
CGCTTTCGCCACCCATCTGCTCAACCACGGCGCTGACCTGCGTGTGGTGCAATTGCTGCTCGGCCATGCCGATATTTCCA
CCACGCAGATCTACACCCACATCGCGCGCGAACGGCTCAAGACGCTGCACGCCCGCCACCACCCCCGCGCCTGA

Protein sequence : 
MPEAPLYLEWPPAPEACATTIDRFCDALWLEDGLSPNTLAAYRRDLTLMARWLAFSQRQPLIEATLRDVQAYIAARFMQS
KATSSNRRLVVLRRFYRWALREHLRTDDPTLQLDTARQPPRRPKTLSEAQVEALLAAPEVDTPLGLRDRAMLELLYASGL
RVSELVALPVVRVSLDQGVVQIAGKGGKERLVPFGSAAQDWLQNYLRTARHELLQGRDSPFLFVTARSGQSARETTGMTR
QMFWMRIKAYARKAGIDVPLSPHTLRHAFATHLLNHGADLRVVQLLLGHADISTTQIYTHIARERLKTLHARHHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 1e-55 53
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 1e-55 53