Gene Information

Name : THI_1709 (THI_1709)
Accession : YP_003624216.1
Strain : Thiomonas sp. 3As
Genome accession: NC_014145
Putative virulence/resistance : Unknown
Product : transposase of ISThsp3, IS66 family, ORFC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1698422 - 1699981 bp
Length : 1560 bp
Strand : -
Note : Evidence 2b : Function of strongly homologous gene; Product type e : enzyme

DNA sequence : 
ATGGTCAGCGCCATCGACGACGACAAACTCCAGTCCCTGGGCGACGATCCGGCGGCGCAGTACGCGCGCACGGTCATTGC
GCAGTTCGGTGCACAGATCGCGCACCAGCGTGCCGAGCTCAAATTTCAATCGACCAAGATTGCGGCCCTGAGCTTCGAGC
TGGCGCGCCTCAAGCAATGGCGCTTCGGCCAGTCCAGCGAGAGCCTGGACACGCAAGGCCAGCTCTTCGACGCCAAGACG
CAGGCGCTGCTGCAAGCCGAGGAACAGGCCGAGGACCGCGCCGCCGATGAGGAGCGCACCGCCCCAGGCAAACGTCTCCC
CAAACGCCAGCCCCTGCCCAGCCAGTTGCCGCGCATCGAACACCGCTACGAGATCGACTCCGGCCTGTGCCCGCAGGGCC
ACGCCCTGCGCCGTATCGGGCAGGAGATCAGCGAGCAGCTCGACTGCGAGCCCACACGCTTCTTCGTGCACCGGCACGTC
CGCGGCAAGTACGCCTGTGCGTGCTGCCAGACGGTGTTGGCTGCACCCCTGCCAGCGCAACTCATTGACAAAGGCATTCC
CGCCCCCGGCCTGCTGGCGCAGGTGGTGCTGGCCAAGCACGACGATCACCTGCCGTTGTACCGCCAGGAGGAGATTTACC
GCCGCAGCGGCGTGCACCTCCCGCGCTCGAGCATGGCGCAGTGGGTGGGCCTGTGCGGGGTGCGCCTGGAACCGCTGGCC
CAGGCCCTCAAAGACCATCTGCTGGAGCAACCCGTGCTGCATGCCGATGAGACCCCGGTAGCCGAGCTGGCGCCGGGCAC
GGGCAAGACACACCGCGCTTATGTCTGGGTCTACCGCAGCGCGGCTACGCCGGCGGTGGTGTTTGACTATTGCGCCAGTC
GTGCCGGTGCGCATGCGCGCGACTTCCTGCAGGATTGGTCAGGCACCTTGCTCACCGATGACTTCAGCGGCTACAAGGCG
CTGTATGCCCAAGGGAGCGTTGTGGAGGCGGGTTGCTGGGCGCATGTACGCAGAAAGTTCTTCGAGGCGCACAAGCTGGC
GGGCAGCGCGATTGCGCAGGAGGCGCTTAAGCGCATCAAAGCCTTGTATGCCATTGAGCAGACCCTTCAGGAGCATCCGC
CCGATGGGCGCACCGCGCTGCGCCAGCGCCAAAGCCAACCCCTGCTCGATGCCTTGCACGCCTGGCTGATCGGGCAGCGC
TCGCTCTTGGCCAAGGCCGACGCCACGGCGCGGGCCATCGACTATGCGCTGGGCCGGTGGCGGGCGTTGTGTGTGTTTGC
CACCGATGGGCGCGTGCCGATCGATAACAACGCGGTGGAAAACGCCATTCGGCCTCTCGCACTCGGGCGCCGAAACTGGC
TCTTCGTGGGCTCGCCCCAGGCCGGCCGCCGAGCCGCCGTGCTCATGACGCTGATCGAATCGGCCAAGCTCTGCGAGGTC
GACCCCTGGGCCTATCTCAAGGACGTGCTGACGAAGCTGCCCACCTGGCCCAACAGCCGTCTGGGCGAATTGCTGCCCCA
CAACTGGGCGAAAACCAATCCCCCTGCACTCAGCACCTGA

Protein sequence : 
MVSAIDDDKLQSLGDDPAAQYARTVIAQFGAQIAHQRAELKFQSTKIAALSFELARLKQWRFGQSSESLDTQGQLFDAKT
QALLQAEEQAEDRAADEERTAPGKRLPKRQPLPSQLPRIEHRYEIDSGLCPQGHALRRIGQEISEQLDCEPTRFFVHRHV
RGKYACACCQTVLAAPLPAQLIDKGIPAPGLLAQVVLAKHDDHLPLYRQEEIYRRSGVHLPRSSMAQWVGLCGVRLEPLA
QALKDHLLEQPVLHADETPVAELAPGTGKTHRAYVWVYRSAATPAVVFDYCASRAGAHARDFLQDWSGTLLTDDFSGYKA
LYAQGSVVEAGCWAHVRRKFFEAHKLAGSAIAQEALKRIKALYAIEQTLQEHPPDGRTALRQRQSQPLLDALHAWLIGQR
SLLAKADATARAIDYALGRWRALCVFATDGRVPIDNNAVENAIRPLALGRRNWLFVGSPQAGRRAAVLMTLIESAKLCEV
DPWAYLKDVLTKLPTWPNSRLGELLPHNWAKTNPPALST

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
RL059 AAP84184.1 transposase Not tested PAPI-1 Protein 2e-108 49
tnpC AEZ06051.1 transposase Not tested Tn6167 Protein 5e-96 45
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 5e-80 44
ECO103_3554 YP_003223421.1 hypothetical protein Not tested LEE Protein 1e-66 42
Z4317 NP_289543.1 hypothetical protein Not tested OI-122 Protein 5e-67 42
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 6e-82 41
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 6e-82 41
tnp AEA34686.1 transposase Not tested Not named Protein 1e-81 41
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 8e-82 41
unnamed AAC31494.1 L0015 Not tested LEE Protein 5e-82 41
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 1e-81 41
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 4e-82 41
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 4e-82 41
unnamed AAL57570.1 unknown Not tested LEE Protein 3e-82 41
Z4340 NP_289564.1 hypothetical protein Not tested OI-122 Protein 4e-76 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
THI_1709 YP_003624216.1 transposase of ISThsp3, IS66 family, ORFC VFG0793 Protein 3e-82 41