Gene Information

Name : THI_1316 (THI_1316)
Accession : YP_003623842.1
Strain : Thiomonas sp. 3As
Genome accession: NC_014145
Putative virulence/resistance : Unknown
Product : transposase of ISThsp3, IS66 family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1304122 - 1305660 bp
Length : 1539 bp
Strand : +
Note : Evidence 2b : Function of strongly homologous gene; Product type e : enzyme

DNA sequence :
ATGGTCAGCGCCATCGACGACGACAAACTCCAGTCCCTGGGCGACGATCCGGCGGCGCAGTACGCGCGTACGGTCATTGC
CCAGATGCAGGCCGATCTGAAGTTCCAGCAGACCAAGATTGCGGCCCTGAGCTTCGAGCTGGCGCGCCTCAAGCAATGGC
GCTTCGGCCAGTCCAGCGAGAGCCTGGACACGCAAGGCCAGCTCTTCGACGCCAAGACGCAGGCGCTGCTGCAAGCCGAG
GAACAGGCCGAGGACCGCGCCGCCGATGCGGAGCGCACCGCCCCAGGCAAACGTCGCCCCAAACGCCAGCCCCTGCCCAG
CCAGTTGCCGCGCATCGAGCATCGCTACGAGATCGACTCCGGCCTGTGCCCGCAGGGCCACACCCTGCGCCGTATCGGGG
AGGAGATCAGCGAGCAACTCGACTGCGAGCCCACGCGTTTCTTCGTGCACCGGCACATCCGCGGCAAGTATGCCTGCGCC
TGCTGCCAGACGGTGTTGGCTGCACCCCTGCCAGCGCAACTCATTGACAAAGGCATTCCCGCCCCCGGCCTGCTGGCGCA
GGTGGTGCTGGCCAAGCACGACGATCACCTGCCGCTGTACCGCCAGGAGGAGATTTACCGCCGCAGCGGCGTGCACCTCC
CGCGCTCGAGCCTGGCGCAGTGGGTGGGCCTGTGCGGGGTGCGCCTGGAACCGCTGGCCCAGGCCCTCAAAGACCATCTG
CTGGAGCAACCCGTGCTGCATGCCGATGAGACCCCGGTAGCCGAGCTGGCGCCGGGCACGGGCAAGACACACCGCGCTTA
TGTCTGGGTCTACCGCAGCGCGGCTACGCCGGCGGTGGTGTTTGACTATTGCGCCAGTCGTGCCGGTGCGCATGCGCGCG
ACTTCCTGCAGGATTGGTCAGGCACCTTGCTCACCGATGACTTCAGCGGCTACAAGGCGCTGTATGCCCAGGGGAGCATT
GTGGAGGCGGGGTGCTGGGCGCATGTACGCAGAAAGTTCTTCGAGGCGCACAAGCTGGCGGGCAGCGCCATCGCGCAGGA
GGCGCTTGAGCGCATCAAAGCCTTGTATGCCATTGAGCAGACCCTTCAGGAGCATCCGCCCGATGGGCGCACCGCGCTGC
GCCAGCGCCAAAGCCAACCCCTGCTCGATGCCTTGCACGCCTGGCTGATCGGGCAGCGCTCGCTCTTGGCCAAGGCCGAC
GCCACGGCGCGGGCCATCGACTATGCGCTGGGCCGGTGGCGGGCGTTGTGTGTGTTTGCCACCGATGGGCGCGTGCCGAT
CGATAACAACGCGGTGGAAAACGCGATTCGGCCTCTCGCCCTGGGCCGTAAGAATTGGCTCTTCGTGGGCTCGCCCCAGG
CCGGCCGCCGAGCCGCCGTGCTCATGACGCTGATCGAATCGGCCAAGCTGTGCGAGGTCGACCCCTGGGCCTATCTCAAG
GATGTGCTGACGAAGCTGCCCACCTGGCCCAACAGCCGTCTGGGCGAATTGCTGCCGCACAACTGGGCGAATACCAATCC
CCCTGCACTCAGCACCTGA

Protein sequence :
MVSAIDDDKLQSLGDDPAAQYARTVIAQMQADLKFQQTKIAALSFELARLKQWRFGQSSESLDTQGQLFDAKTQALLQAE
EQAEDRAADAERTAPGKRRPKRQPLPSQLPRIEHRYEIDSGLCPQGHTLRRIGEEISEQLDCEPTRFFVHRHIRGKYACA
CCQTVLAAPLPAQLIDKGIPAPGLLAQVVLAKHDDHLPLYRQEEIYRRSGVHLPRSSLAQWVGLCGVRLEPLAQALKDHL
LEQPVLHADETPVAELAPGTGKTHRAYVWVYRSAATPAVVFDYCASRAGAHARDFLQDWSGTLLTDDFSGYKALYAQGSI
VEAGCWAHVRRKFFEAHKLAGSAIAQEALERIKALYAIEQTLQEHPPDGRTALRQRQSQPLLDALHAWLIGQRSLLAKAD
ATARAIDYALGRWRALCVFATDGRVPIDNNAVENAIRPLALGRKNWLFVGSPQAGRRAAVLMTLIESAKLCEVDPWAYLK
DVLTKLPTWPNSRLGELLPHNWANTNPPALST

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
RL059 AAP84184.1 transposase Not tested PAPI-1 Protein 7e-110 50
c3563 NP_755438.1 hypothetical protein Not tested PAI I CFT073 Protein 5e-74 45
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 5e-81 45
tnpC AEZ06051.1 transposase Not tested Tn6167 Protein 4e-97 44
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 1e-84 42
unnamed AAC31494.1 L0015 Not tested LEE Protein 2e-84 41
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 2e-84 41
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 2e-84 41
tnp AEA34686.1 transposase Not tested Not named Protein 3e-84 41
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 1e-83 41
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 3e-84 41
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 1e-83 41
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 4e-84 41
unnamed AAL57570.1 unknown Not tested LEE Protein 1e-84 41
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 2e-84 41
s0025 CAD33772.1 IS66-like transposase Not tested PAI I 536 Protein 4e-62 41
Z4340 NP_289564.1 hypothetical protein Not tested OI-122 Protein 2e-76 41
ECO103_3554 YP_003223421.1 hypothetical protein Not tested LEE Protein 1e-65 41
Z4317 NP_289543.1 hypothetical protein Not tested OI-122 Protein 4e-66 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
THI_1316 YP_003623842.1 transposase of ISThsp3, IS66 family VFG1700 Protein 2e-74 45
THI_1316 YP_003623842.1 transposase of ISThsp3, IS66 family VFG0793 Protein 9e-85 41
THI_1316 YP_003623842.1 transposase of ISThsp3, IS66 family VFG1513 Protein 2e-62 41