Gene Information

Name : THI_p0029 (THI_p0029)
Accession : YP_003622596.1
Strain :
Genome accession: NC_014144
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 17749 - 18573 bp
Length : 825 bp
Strand : +
Note : Evidence 4 : Homologs of previously reported genes of unknown function

DNA sequence :
ATGTTGGCATCCCGTTTTTCTGGCTTTTCCCCGTCTGTGCGCTCACAAACCGCACTCACCGACGACCAAATCCGCCGCGT
CGCCCCGTCGATCTTCGCCGAGGCCGCGCACGAATCGCGCTCGCAGCGTTACACCTACATTCCCACCATCACCGTGCTGG
ACGGACTGCGCAAAGAGGGCTTTGAGCCGTTCTATGCCTGCCAGACCCGCGTGCGGGTGGACGACCGCCGCGAAACCACC
AAGCACATGATGCGCCTGCGCCGAGCGGGTGAGCAGGGCGCGCGGCAGGCCAACGAGGTGATTTTGCTGAACTCCCACGA
CGGCACGAGCAGCTATCAGATGCTCGCCGGAGTGTTCCGCTTTGTCTGCAGCAATGGCATGGTGTGCGGCGATGTCGTTG
ACGAAATCCGCGTGCCGCATAAGGGCAACGTGGTGCAGGAGGTCATCGAGGGCGCTTTTCGCGTGGTCGATGGCTTCGCC
CAGGTGGACAGTGCGCGCGAAGGCATGCAAGCCATCGGCTTGTCCCGTGATGCGCAGCATGCGCTCGCAGAATCCGCCCT
TGTGCTGCGCTATGACGAGGCCAACGGCCCGGCCCCCGTGACGCCCGCGCAGGTGTTGGAGGCCCGGCGCTTCGATGATC
GCGCCGATGATCTGTGGACGACTTTTAACCGGGTGCAAGAAAACCTAGTGCGGGGCGGGCAAGCTGGACGCAACCGCGCC
GGACGCCGCGCCACGACCCGCGAAGTCACCGGCATCGACCAGGGGGTGAAACTCAATCGGGCGCTTTGGGTTCTGGCCGA
GCGCATGCGCGAAATTCTCGGATGA

Protein sequence :
MLASRFSGFSPSVRSQTALTDDQIRRVAPSIFAEAAHESRSQRYTYIPTITVLDGLRKEGFEPFYACQTRVRVDDRRETT
KHMMRLRRAGEQGARQANEVILLNSHDGTSSYQMLAGVFRFVCSNGMVCGDVVDEIRVPHKGNVVQEVIEGAFRVVDGFA
QVDSAREGMQAIGLSRDAQHALAESALVLRYDEANGPAPVTPAQVLEARRFDDRADDLWTTFNRVQENLVRGGQAGRNRA
GRRATTREVTGIDQGVKLNRALWVLAERMREILG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG86 AAN62307.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 3e-75 62
ORF C80 AAN62174.1 conserved hypothetical protein; associated with oriT region on plasmids Not tested PAGI-2(C) Protein 2e-74 61
ECO103_3587 YP_003223444.1 hypothetical protein Not tested LEE Protein 2e-62 55
aec71 AAW51754.1 Aec71 Not tested AGI-3 Protein 3e-62 54
yafZ ADD91704.1 YafZ Not tested PAI-I AL862 Protein 3e-62 54
S3199 NP_838482.1 hypothetical protein Not tested SHI-1 Protein 2e-62 54
SF2994 NP_708768.1 hypothetical protein Not tested SHI-1 Protein 2e-62 54
unnamed CAI43843.1 hypothetical protein Not tested LEE Protein 3e-62 54
unnamed CAD66201.1 hypothetical protein Not tested PAI III 536 Protein 7e-61 53
Z1215 NP_286750.1 hypothetical protein Not tested TAI Protein 3e-62 53
Z1655 NP_287158.1 hypothetical protein Not tested TAI Protein 3e-62 53
ORF_47 AAZ04456.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 5e-60 53
yafZ YP_854321.1 hypothetical protein Not tested PAI I APEC-O1 Protein 6e-60 53
c5156 NP_757004.1 hypothetical protein Not tested PAI II CFT073 Protein 6e-60 53
yafZ CAE85199.1 YafZ protein Not tested PAI V 536 Protein 4e-65 52
z1215 CAD33785.1 Z1215 protein Not tested PAI I 536 Protein 2e-60 52
unnamed CAD42096.1 hypothetical protein Not tested PAI II 536 Protein 2e-60 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
THI_p0029 YP_003622596.1 hypothetical protein VFG0658 Protein 8e-63 54
THI_p0029 YP_003622596.1 hypothetical protein VFG1676 Protein 4e-61 53
THI_p0029 YP_003622596.1 hypothetical protein VFG1615 Protein 9e-61 52
THI_p0029 YP_003622596.1 hypothetical protein VFG1526 Protein 9e-61 52