|
Name : tnpA (THI_p0012) Accession : YP_003622581.1 Strain : Genome accession: NC_014144 Putative virulence/resistance : Unknown Product : Transposase for ISThsp9 transposon of the Tn3 family Function : - COG functional category : - COG ID : - EC number : - Position : 6057 - 9029 bp Length : 2973 bp Strand : - Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 391406; Product type e : enzyme DNA sequence : ATGCCGGTCAGCTTCCTGTCCACCACGCAACGGGAACGCTACGGCCGCTATCCAGAGACGCTTTCCAGCGAAGAACTGGC GCGCTACTTCCACCTGGACGACGATGACCGCGAGTGGATCGCCACCAAGCGGCGCGACAGCCACCGACTGGGCTATGCGC TGCAACTGACCACGGCTCGCTTTCTCGGCACCTTCCTGGAAGACCCGGCCGCCGTGCCCGGTGCGGTACTGCATACGCTG TCGTCCCAGCTCGGCATCGCCGACCCCGACTGCGTGCTGGCCTACCGCGAGAGCGAGCAACGCTGGCGGCACACGACCGA GATTCGTGCCCGCTACGGCTATCGTGAATTTGCCGACGGCGGCGTGCAGTTCCGCCTTGGCCGGTGGCTATGCGCGCTGT GCTGGACGGGCACCGACCGGCCGAGCGCGCTGTTCGATTACGCCAACGGCTGGCTGGTCGGTCACAAGGTGCTGCTGCCC GGCGTCACGGTGCTGGAACGCTTCATCGCTGAAGTGCGCTCGCGCATGGAGTCGCGCCTGTGGCGTCTGCTCGTGCGCGG CGTGACGGCTGCACAGCGGCAGCGACTCGATGATCTGCTCAAGCCCGCCGAAGGCAGCCGCCAGTCCTGGCTGGATCGAT TGCGCAAGGGGCCAGTGCGCGTCAGCGCTCCGGCGCTCGTGTTGGCCTTGCTGCGCATCGAGACCGTGCGCGGCCTGGGC ATCAGGCTGCCTGGCACCCATGTGCCGCCGAGCCGCATCGCGGCACTGGCCCGCTTCGCCAGCACCGTCAAGGTGTCCGC CGTGGCCCGGCTGCCGGAAGCGCGGCGCATCGCCACGCTGGTGGCCTTCGTGCATTGCCTGGAAGCCAGCGCGCAGGACG ACGCCCTCGATGTGCTCGACCTGCTGCTACGCGAACTGTTCACCAAGGCCGAGAAGGAAGACCGCAAGGTCAGGCAGCGC TCGCTCAAGGATCTGGATCGGGCCGCCTCGACGCTGGCCGAGGCTTGCCGGATGCTGCTCGATCCGGCCTTGCCGGACGG CGAACTGCGCGAGCGCGTCTATGCCGCCATCGGCCGCGATGAACTGGCCCAGGCGCTCAATGAGGTTCGCGGCCTGGTGC GTCCGCCAAACGATGTGTTCTATACCGAGCTGGAGGCCCGCAAGGCCACCGTTTCGCGTTTCCTGCCGACGTTGCTGCGC GTCATCCGCTTCGACGCCAATCCGGCCGCGCAGCCTTTGGCGCAGGCGTTGCAATGGCTGCATGAGAAGCCCGACCATGA TCCGCCTACGGCCATCGTCGGCAAGGCGTGGCAGCGCCATGTCGTGCAGGATGACGGCCGCATCAATGCCACGGCCTATT CGTTCTGCGCGCTCGACAAGCTGCGCAGCGCGATTCGCCGCCGCGACGTGTTCATCAGCCCGAGTTGGCGCTACGCCGAT CCACGCGCCGGGCTGCTGGCCGGGGCCGAGTGGGAGGCCGCGCGGCCCATCGTCTGCCGCTCGCTGGGCCTGACGGCGCA GCCCGAGGCTACGTTGTCCGCGCTGACGCGCGAACTGGACGAGACCTACCGGCGCGTCGCCGCACGCCTGCCCGAGAACG ACGCAGTGCGCTTCGAGACAGTCGGCGACAAGACCGAACTGGTGCTCAGCCCCTTGGAGGCGCTGGAAGAACCGGCTTCG CTGATCGCGCTGCGCAACGAGATCAAGGCGCGCATGCCGCGTGTCGATCTGCCGGAAATCCTATTGGAAGTCGCCGCGCG CACCGGCTGCATGGAGGCGTTCACGCACCTGACCGAGCGCACCGCACGCGCGGCCGATCTGACCACCAGCCTGTGCGCGG TGCTGATGGCCGAGGCCTGCAACACCGGCCCCGAACCGCTCGTGCGGCAGGACTCCCCGGCGCTCAGGCGCGACCGGCTG ATGTGGGTCGATCAGAACTACGTGCGCGACGACACGTTGATCGCCTGCAACGCCGTGCTGGTGGCGGCGCAGAACCGCAT CGCGCTGGCCCGCGCCTGGGGCGGCGGCGACGTGGCCTCGGCGGACGGCATGCGCTTCGTGGTGCCGGTGCGCACCATCC ACGCCGCGCCGAACCCGAAATACTTCAATCGCGGGCGCGGCGTCACCTGGTACAACCTGCTGTCCGATCAATGCACCGGG CTGAACGCCATCACCGTTCCCGGCACGCTGCGCGACAGCCTGGTCTTGCTGGCGGTTGTGTTGGAGCAGCAGACCGAATT GCAGCCGACGCAGATCATGACCGACACCGGCGCGTACAGCGACGTGGTGTTTGGTTTGTTCCGTCTCTCCGGCTACCGTT TCTGCCCACGCCTGGCCGACGTTGGCGGAACGCGCTTCTGGCGCGTGGACGCCGAGGCCGACTATGGCGACCTCAATACA CTGGCACGGCAGCGCGTGAACCTCGACCGCATCACGCCGCATTGGGATGACGTGCTGCGCCTGGTCGGCTCGCTCAAACT CGGCATGGTGCCGGCGATGGGCATCATGCGCACCTTGCAGGTCGATGAGCGGCCCACCAGCCTGGCGCAGGCCATCGCCG AAATCGGCCGCATCGACAAGACCATCCATACGCTGAACTTCATCGACGACGAGGCCCGCCGCCGCGCCACGTTGCTGCAA TTGAATCTCGGCGAAGGCCGCCACAGCCTGGCGCGCGAAGTCTTCCACGGCAAGCGCGGCGAGCTGTTCCAGCGTTACCG CGAAGGGCAGGAGGACCAGTTGAGCGCGCTCGGCCTGGTCGTCAACATGATCGTGCTGTGGAACACGCTGTACATGGACG CGGTGCTCGCGCAGTTGCGCAGCGAGGGCTACCGGGTGAAGCCCGAGGACGAGGCTCGGCTGTCGCCGTTCGGCCATGAG CACATCAACATGCTTGGACGCTACTCGTTCTCGGTGCCGGAGGCGGTCGCCCGTGGCGAGCTGCGACCCCTGAGCAGGAA GGACGACGTTTGA Protein sequence : MPVSFLSTTQRERYGRYPETLSSEELARYFHLDDDDREWIATKRRDSHRLGYALQLTTARFLGTFLEDPAAVPGAVLHTL SSQLGIADPDCVLAYRESEQRWRHTTEIRARYGYREFADGGVQFRLGRWLCALCWTGTDRPSALFDYANGWLVGHKVLLP GVTVLERFIAEVRSRMESRLWRLLVRGVTAAQRQRLDDLLKPAEGSRQSWLDRLRKGPVRVSAPALVLALLRIETVRGLG IRLPGTHVPPSRIAALARFASTVKVSAVARLPEARRIATLVAFVHCLEASAQDDALDVLDLLLRELFTKAEKEDRKVRQR SLKDLDRAASTLAEACRMLLDPALPDGELRERVYAAIGRDELAQALNEVRGLVRPPNDVFYTELEARKATVSRFLPTLLR VIRFDANPAAQPLAQALQWLHEKPDHDPPTAIVGKAWQRHVVQDDGRINATAYSFCALDKLRSAIRRRDVFISPSWRYAD PRAGLLAGAEWEAARPIVCRSLGLTAQPEATLSALTRELDETYRRVAARLPENDAVRFETVGDKTELVLSPLEALEEPAS LIALRNEIKARMPRVDLPEILLEVAARTGCMEAFTHLTERTARAADLTTSLCAVLMAEACNTGPEPLVRQDSPALRRDRL MWVDQNYVRDDTLIACNAVLVAAQNRIALARAWGGGDVASADGMRFVVPVRTIHAAPNPKYFNRGRGVTWYNLLSDQCTG LNAITVPGTLRDSLVLLAVVLEQQTELQPTQIMTDTGAYSDVVFGLFRLSGYRFCPRLADVGGTRFWRVDAEADYGDLNT LARQRVNLDRITPHWDDVLRLVGSLKLGMVPAMGIMRTLQVDERPTSLAQAIAEIGRIDKTIHTLNFIDDEARRRATLLQ LNLGEGRHSLAREVFHGKRGELFQRYREGQEDQLSALGLVVNMIVLWNTLYMDAVLAQLRSEGYRVKPEDEARLSPFGHE HINMLGRYSFSVPEAVARGELRPLSRKDDV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| IS15 | CAJ77073.1 | Insertion sequence | Not tested | AbaR1 | Protein | 0.0 | 49 |
| unnamed | ACF06166.1 | transposase | Not tested | Tn5036-like | Protein | 0.0 | 49 |
| tnpA | ACN81014.1 | transposase | Not tested | AbaR5 | Protein | 0.0 | 48 |
| tnpA | AFV53105.1 | transposase | Not tested | AbGRI2-1 | Protein | 0.0 | 48 |
| ABTW07_3870 | YP_005797118.1 | transposase IS26 | Not tested | AbaR4e | Protein | 0.0 | 48 |
| 1_314 | CAJ77075.1 | Transposase | Not tested | AbaR1 | Protein | 0.0 | 48 |
