Gene Information

Name : lpa_04275 (lpa_04275)
Accession : YP_003620294.1
Strain : Legionella pneumophila 2300/99 Alcoy
Genome accession: NC_014125
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3418809 - 3419498 bp
Length : 690 bp
Strand : -
Note : COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]

DNA sequence :

ATGATTGACAGACCTTTAATCCAACTTTCTGATTTGGTGAAGACTTATCATCTTGAGGGTATCAGTACCACGGTATTAAA
AGCAGTGTCTTTGACCGTAAACGAAGGTGATTTGCTCGCTATTGTCGGTGCGTCCGGCTCTGGTAAATCCACGTTAATGA
ACATCATCGGCTTATTGGATAAACCGGATGCAGGAACTTATACCTTAAATAATAGAAATGTGGCCAGCTTAAGCGACGAT
GAGGCGGCTGATTTGCGCAATCAAAATATAGGTTTTGTTTTTCAGCAGTTTAATTTGCTTCCTCGTTTTACAGCAATGCA
AAATGTGGCTTTGCCTTTGACGTACCGAGGGGTCAACCCCACTTTGATAAAAGAAAAAGTGGAGCAAGCACTGGATAAAG
TAGGAATGCGCCAATACATCCGCCACAGGCCAACCCAATTATCTGGCGGTCAGCAGCAGCGAGTTGCTATCGCCAGAGCG
TTAGTGACCGACCCACAGGTTATTCTCGCTGATGAGCCGACCGGTGCGCTGGATTCAAGAACAGGTAGCGAGGTAATGAA
TTTGTTTTTGGCCTTACACCAGGAAGGCCGGACTATCATCATGGTGACCCATGATGAGCACGTGGCCGCGCAATGCAAAC
GCCGAATAACCTTAGCTGATGGGGCAATTATAGCGGAGTCCGGGCAATGA

Protein sequence :

MIDRPLIQLSDLVKTYHLEGISTTVLKAVSLTVNEGDLLAIVGASGSGKSTLMNIIGLLDKPDAGTYTLNNRNVASLSDD
EAADLRNQNIGFVFQQFNLLPRFTAMQNVALPLTYRGVNPTLIKEKVEQALDKVGMRQYIRHRPTQLSGGQQQRVAIARA
LVTDPQVILADEPTGALDSRTGSEVMNLFLALHQEGRTIIMVTHDEHVAAQCKRRITLADGAIIAESGQ

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
Cp1002_1464	YP_005681730.1	ABC transporter ATP-binding protein	Not tested	PiCp 5	Protein	8e-31	42
CpC231_1466	YP_005683828.1	ABC transporter ATP-binding protein	Not tested	PiCp 5	Protein	1e-31	41
cpfrc_01473	YP_003783873.1	hypothetical protein	Not tested	PiCp 5	Protein	1e-31	41
CpI19_1473	YP_005685914.1	ABC transporter ATP-binding protein	Not tested	PiCp 5	Protein	1e-31	41

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
lpa_04275	YP_003620294.1	ABC-type antimicrobial peptide transport system	NC_012469.1.7686878.	Protein	2e-57	53
lpa_04275	YP_003620294.1	ABC-type antimicrobial peptide transport system	NC_008702.1.4606598.	Protein	3e-45	49
lpa_04275	YP_003620294.1	ABC-type antimicrobial peptide transport system	CP001581.1.gene798.p	Protein	6e-36	42