Gene Information

Name : lpa_00270 (lpa_00270)
Accession : YP_003617389.1
Strain : Legionella pneumophila 2300/99 Alcoy
Genome accession: NC_014125
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0582
EC number : -
Position : 213533 - 214753 bp
Length : 1221 bp
Strand : +
Note : -

DNA sequence : 
ATGACAGAAAACAAAAGGAAAGGCCCACTACAAGATACCACCATCCGTAATGCCAAAGCAGAGAAAAAACCCTATAAAAT
GCCTGATGAGCGAGGTTTATATCTAGAGGTTGCCCCTTCTGGAGGCAAGTGGTGGCGTTTTAGGTATCGCTTCGAGGGTA
AAGACAAAAGAATCTCTTTAGGCATTTATCCTGATGTTAGCTTAAAACAAGCTCGAGACCGCAGAGATGAATGTCGCACG
ATGGTTGCAAATGAAATTGATCCTAGCGAGCATCGCAAAGCTAAAAAGGCAGCAAAAATTGAAAATGCTGCAAATAGTTT
TGAAGTTGTAGCTAGAGAATGGTTTTTAAAATTCTCCTCTTCTGGACTATGGTCAGAAGGTCATGCAGACAAAATTATTC
AGAGATTAGAACGGGACATTTTCCCATGGATTGGGAATATTCCAATTTCAGATATTAATGCACCAAAGCTTTTAAGTGTT
GTGCGGCGAATTGAAAGTCGAGGAGCACTAGATACAGCTCACCGCGCATTAGGCAATTGCGGACAAATATTTCGATATGC
TATTGCTACAGGTCGTGCAGAGCGTGATCCTTCCCAAGATTTACGAAGTGCATTACCACCAGTGAAGGAAACACATTTTG
CTGCAGTTACTGAACCTAAAGATGTGGCTAAATTACTAAGAGCTTTAGATGACTACGAAGGAACATTAATAGTAAAGTGT
GCATTACGTTTAGCTCCATTAGTATTTGTTCGCCCTGGGGAATTGCGTTCTGCAGAGTGGGAGCATATTGATTTTGACAC
GGCAGAATGGCGTTACAAAGTTACAAAAACAGATACTCTTCATATTGTCCCCCTTTCACAACAGGCCTTAGATATATTAA
AAGAACTTCACCCTCAGACTGGTCGCGATAGATATGTTTTCCCAAGCGCTCGGGATAAAAAGCGCCCAATGAGTGATAAT
GCGATTCTGGCCGCTATGCGTCGTATGGGCATTAATAAAGAAGAAATGACTACCCATGGTTTTAGAGCAATGGCTAGGAC
TATTCTAGATGAGGTTTTGCAGTTTCGGCCAGACATCATTGAACATCAATTAGCACATGCTGTACGAGATCCTAATGGTC
GCGCATATAACCGAACAGCTCATTTGCCTGAGCGCAAGAAAATGATGCAGGCGTGGGCTGATTATTTGGATGAATTGAAG
TTGAGAAAATCAGAATTATAA

Protein sequence : 
MTENKRKGPLQDTTIRNAKAEKKPYKMPDERGLYLEVAPSGGKWWRFRYRFEGKDKRISLGIYPDVSLKQARDRRDECRT
MVANEIDPSEHRKAKKAAKIENAANSFEVVAREWFLKFSSSGLWSEGHADKIIQRLERDIFPWIGNIPISDINAPKLLSV
VRRIESRGALDTAHRALGNCGQIFRYAIATGRAERDPSQDLRSALPPVKETHFAAVTEPKDVAKLLRALDDYEGTLIVKC
ALRLAPLVFVRPGELRSAEWEHIDFDTAEWRYKVTKTDTLHIVPLSQQALDILKELHPQTGRDRYVFPSARDKKRPMSDN
AILAAMRRMGINKEEMTTHGFRAMARTILDEVLQFRPDIIEHQLAHAVRDPNGRAYNRTAHLPERKKMMQAWADYLDELK
LRKSEL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
int AAD44730.1 Int Not tested SHI-2 Protein 2e-70 42
int CAC39282.1 integrase Not tested LPA Protein 6e-70 42
aec33 AAW51716.1 Int Not tested AGI-3 Protein 5e-70 42
ESA_03025 YP_001439090.1 hypothetical protein Not tested Not named Protein 1e-64 42
int AAD54663.1 Sai integrase Not tested SHI-2 Protein 1e-69 42
S4835 NP_839238.1 integrase Not tested SHI-2 Protein 1e-69 42
SF3698 NP_709437.1 integrase Not tested SHI-2 Protein 1e-69 42
intL NP_290239.1 integrase for prophage 933L and the LEE pathogenicity island Not tested LEE Protein 7e-69 41
ECs4534 NP_312561.1 integrase Not tested LEE Protein 7e-69 41
int AAC31482.1 CP4-like integrase Not tested LEE Protein 5e-69 41
int ACU09430.1 integrase Not tested LEE Protein 5e-69 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lpa_00270 YP_003617389.1 hypothetical protein VFG0598 Protein 6e-70 42
lpa_00270 YP_003617389.1 hypothetical protein VFG0783 Protein 3e-69 41