Gene Information

Name : lpa_02010 (lpa_02010)
Accession : YP_003618642.1
Strain : Legionella pneumophila 2300/99 Alcoy
Genome accession: NC_014125
Putative virulence/resistance : Virulence
Product : general secretion pathway protein F
Function : -
COG functional category : N : Cell motility
COG ID : COG1459
EC number : -
Position : 1571414 - 1572613 bp
Length : 1200 bp
Strand : -
Note : COG1459, PulF, Type II secretory pathway, component PulF [Cell motility and secretion / Intracellular trafficking and secretion]

DNA sequence :
ATGGGCGCCTACCAATATCAAGCGCTAAAAGTGAATGGCAGCATTAGCAAAGGTGTAATAGAAGCTGATTCTGAACGTCA
TGCACGTCAATTATTGCGAGAACAAGGACTAATCCCTACTCAAGTCCAAACATTAACCCAGCAACGTGCTGCCAGCAGCA
AAAGTAAAGTTTCTGCGGCTGATTTGGCATTACTCACCAGACAGCTGGCAACACTTCTAGCTGCCGGTATTCCTGTTGAA
GAATCATTGCGCGGGGTCAGCGAACAAACAGAAAAAGACAAAGTCAGAGAGCTTATTATCGGAGTTCGCTCTAAAGTATT
GGAAGGGTATGGTCTTGCTCAGGCAATGGCTCAATATCCCAATGCCTTTCCAGAACTATACCGGGCAACAGTAGGCTCAG
GCGAGCAGACAGGGCGTCTTGATGTTGTTTTAGAAAAACTGGCTGATTATACTGAAAAACAACAACAAACTCGACAGAAA
GTGCAGCAAGCTTTGATTTACCCATTGCTCATGATCATTGTTTCTACTGCCATTATCAGTTTTTTACTTACTTTTGTTGT
CCCTAAAATTATTGATGTATTTACCGAAAGTGGCCAAACACTACCACCAATGACGCAATTGCTTATTAACTTGAGCCAAT
TTATTAAATCTTATGGTTTGTATAGTCTAGTGACAATGATTGTGGCTCTAATTGGCTTTAAAAAGAGCCTCAGTAATATA
AAAATTAAAACAGCATGGCATCAATTCATGCTTAAACTACCTATCGTGTCTTATTTGGTTAAAACAATTAATGTCGCGCG
ATATATTCACACGTTTGGAATTCTATTTGCAGCGGGAGTCAGTGTACTTGAAACCATGCGTGTTTCTTCAAGTTTGGTAA
CCAATATCGTGATGAGACAGGCTTTTGATTTAGCTACTCTACGAGTCCGTGAAGGAAGTGGAATCAGTGAGGCCCTCAAA
GAAACAAAATTCATTAGCCCCATGGCTATCCATCTGATAGCCAGTGGTGAGAAAAGCGGCCAACTTTCAGACATGATGGA
ACGCTCGGCGTCTCATTTAGATAATGAAGTAAACCGACTGATTGAAACATCCTTAACTTTATTAGAACCTATGGTTATTC
TATTAATGGGTGCTGTTGTTTTATTTATTGTACTAGCGACCTTATTACCTATTTTTTCAATGGAACAATTAGTTGCCTGA

Protein sequence :
MGAYQYQALKVNGSISKGVIEADSERHARQLLREQGLIPTQVQTLTQQRAASSKSKVSAADLALLTRQLATLLAAGIPVE
ESLRGVSEQTEKDKVRELIIGVRSKVLEGYGLAQAMAQYPNAFPELYRATVGSGEQTGRLDVVLEKLADYTEKQQQTRQK
VQQALIYPLLMIIVSTAIISFLLTFVVPKIIDVFTESGQTLPPMTQLLINLSQFIKSYGLYSLVTMIVALIGFKKSLSNI
KIKTAWHQFMLKLPIVSYLVKTINVARYIHTFGILFAAGVSVLETMRVSSSLVTNIVMRQAFDLATLRVREGSGISEALK
ETKFISPMAIHLIASGEKSGQLSDMMERSASHLDNEVNRLIETSLTLLEPMVILLMGAVVLFIVLATLLPIFSMEQLVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspF CAE85232.1 GspF, hypothetical type II secretion protein Not tested PAI V 536 Protein 6e-63 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lpa_02010 YP_003618642.1 general secretion pathway protein F VFG1870 Protein 2e-165 99
lpa_02010 YP_003618642.1 general secretion pathway protein F VFG0181 Protein 3e-78 45
lpa_02010 YP_003618642.1 general secretion pathway protein F VFG2049 Protein 9e-63 41