Gene Information

Name : Metin_1327 (Metin_1327)
Accession : YP_003616941.1
Strain : Methanocaldococcus infernus ME
Genome accession: NC_014122
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1187580 - 1188269 bp
Length : 690 bp
Strand : +
Note : KEGG: mja:MJ0796 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: ATPase AAA

DNA sequence : 
ATGATTGAACTAAAAAATGTAACCAAAGTTTATAAGATGGGTAATGAGCTAATCTATGCTTTAAAAAACATAAATTTAAA
AATAAAAGAGGGTGAATTTGTTTCAATTATGGGACCCTCAGGAAGTGGTAAGTCTACTCTATTAAATATTATTGGTTGTT
TAGACAGGCCAACAGAGGGAGAGGTTTACATTGACAAAATAAAAACAAATGATTTAGATGATGATGAATTAACAAAAATT
AGAAGGGATAAGATTGGCTTTGTCTTCCAACAATTTAATTTAATCCCTCTACTAACAGCTTTAGAGAATGTTGAGCTTCC
ACTAATTTTTAAATATAAGAATTCTATGAGTGAAGCTGAGAGGAAAAGAAGAGCTTTAGAATGCTTAAAGATGGCTGAGT
TGGATGAGAAATTTGCTAACCACAAGCCAAATCAGTTGAGTGGAGGACAACAGCAGAGAGTGGCTATAGCAAGGGCTATA
GTAAATGATCCAAAAATTATTTTAGCTGATGAACCAACTGGAGCCTTAGATAGTAAAACAGGAAGGAAAATTATGGAATT
ATTAAAGAAATTAAATGGCTATGGAAAAACTATTGTGGTTGTTACTCATGATATAAATGTATCTAAATATGGAGATAGAA
TAATTTATATAAAGGATGGCTCAATTGAAAGGGAAGAGAATGTATCTTGA

Protein sequence : 
MIELKNVTKVYKMGNELIYALKNINLKIKEGEFVSIMGPSGSGKSTLLNIIGCLDRPTEGEVYIDKIKTNDLDDDELTKI
RRDKIGFVFQQFNLIPLLTALENVELPLIFKYKNSMSEAERKRRALECLKMAELDEKFANHKPNQLSGGQQQRVAIARAI
VNDPKIILADEPTGALDSKTGRKIMELLKKLNGYGKTIVVVTHDINVSKYGDRIIYIKDGSIEREENVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 5e-29 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Metin_1327 YP_003616941.1 ABC transporter NC_012469.1.7686878. Protein 4e-55 55
Metin_1327 YP_003616941.1 ABC transporter NC_008702.1.4606598. Protein 1e-44 48
Metin_1327 YP_003616941.1 ABC transporter CP001581.1.gene798.p Protein 6e-41 46
Metin_1327 YP_003616941.1 ABC transporter CP001581.1.gene598.p Protein 3e-39 44
Metin_1327 YP_003616941.1 ABC transporter NC_012469.1.7685735. Protein 3e-34 42