Gene Information

Name : ECL_04562 (ECL_04562)
Accession : YP_003615040.1
Strain : Enterobacter cloacae ATCC 13047
Genome accession: NC_014121
Putative virulence/resistance : Resistance
Product : DNA-binding transcriptional regulator BasR
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 4685069 - 4685731 bp
Length : 663 bp
Strand : +
Note : -

DNA sequence : 
ATGAAACTACTTATAGTTGAAGACGATCTGTTATTACAGGAAGGGCTGGCGCTGGCGCTGTCCAATGAAGGCTATGCCCT
CGACTGCGCCGCCACGGCGGCAGAGGCGGATGCCCTGATCCAGAGCGGTGAATACAGTCTGGTGATCCTCGATCTGGGCC
TCCCGGATAAAGACGGGGCCACGTTGTTAAGCCAGTGGCGGCGTCGCGGTGTTGACAACCCGGTGTTGATCCTGACGGCG
CGCGATGCCATCGAAGATCGTATCAACGGCCTGGATTCCGGCGCGGATGATTATCTGGTGAAGCCGTTTGCCCTTGCAGA
GCTACAGGCGCGCGTGCGGGCGTTAATTCGCCGCTATCAGGGGCACAGTGATAACTTACTGACCGACGGTGATATTACCC
TGAATCTGCAAACTCAGCAGGTGCTGTGCCAGTCTCTGCCTGTTGAGGTCACACCGAAAGAGTTCGCCCTGCTTACGCGT
CTGATCATGCGTAGCGGGCAGACGGTACACCGTGAAACCCTCCAGCAGGATATCTACTCCTGGCAGGACGATCCGGGGTC
GAATACCCTTGAAGTCCACATTCACAATTTGCGACGCAAACTTGGCAAAGACCGGATAAAAACCGTTCGTGGCGTGGGTT
ATCGTCTGGAGAGACAGAAATGA

Protein sequence : 
MKLLIVEDDLLLQEGLALALSNEGYALDCAATAAEADALIQSGEYSLVILDLGLPDKDGATLLSQWRRRGVDNPVLILTA
RDAIEDRINGLDSGADDYLVKPFALAELQARVRALIRRYQGHSDNLLTDGDITLNLQTQQVLCQSLPVEVTPKEFALLTR
LIMRSGQTVHRETLQQDIYSWQDDPGSNTLEVHIHNLRRKLGKDRIKTVRGVGYRLERQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 7e-35 47
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 9e-25 42
vanRB NP_815956.1 DNA-binding response regulator VanRB Not tested Not named Protein 3e-24 41
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 3e-24 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECL_04562 YP_003615040.1 DNA-binding transcriptional regulator BasR BAC0487 Protein 1e-56 69
ECL_04562 YP_003615040.1 DNA-binding transcriptional regulator BasR BAC0197 Protein 5e-27 43
ECL_04562 YP_003615040.1 DNA-binding transcriptional regulator BasR BAC0083 Protein 8e-25 42
ECL_04562 YP_003615040.1 DNA-binding transcriptional regulator BasR BAC0347 Protein 2e-24 41
ECL_04562 YP_003615040.1 DNA-binding transcriptional regulator BasR AE016830.1.gene2255. Protein 1e-24 41
ECL_04562 YP_003615040.1 DNA-binding transcriptional regulator BasR U35369.1.gene1.p01 Protein 1e-24 41
ECL_04562 YP_003615040.1 DNA-binding transcriptional regulator BasR NC_002516.2.879194.p Protein 3e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECL_04562 YP_003615040.1 DNA-binding transcriptional regulator BasR VFG0473 Protein 2e-49 58
ECL_04562 YP_003615040.1 DNA-binding transcriptional regulator BasR VFG0596 Protein 3e-25 42
ECL_04562 YP_003615040.1 DNA-binding transcriptional regulator BasR VFG1390 Protein 3e-21 41