Gene Information

Name : ECL_04209 (ECL_04209)
Accession : YP_003614691.1
Strain : Enterobacter cloacae ATCC 13047
Genome accession: NC_014121
Putative virulence/resistance : Unknown
Product : putative IS911 transposase orfA
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 4322144 - 4322983 bp
Length : 840 bp
Strand : -
Note : -

DNA sequence :
GTGGCCACTCTCTGCCATGTGTTCGGGGTTCATCGCAGCAGCTACAAATACTGGAAAAACCGTCCTGAAAAGCCAGACGG
CAGACGGGCTGTATTACGCAGTCAGGTACTTGAACTGCATGGCATCAGCCACGGCTCTGCCGGAGCAAGAAGCATCGCCA
CAATGGCAACCCAGAGAGGTTACCAGATGGGGCGCTGGCTTGCTGGCAGACTCATGAAAGAGCTGGGGCTGGTCAGTTGC
CAGCAGCCGACTCACCGGTATAAGCGTGGCGGTCATGAGCACGTTGCTATCCCGAATCATCTTGAGCGACAGTTCGCCGT
AACGGAACCAAATCAGGTGTGGTGCGGTGATGTGACCTATATCTGGACGGGTAAGCGCTGGGCGTACCTCGCCGTTGTTC
TCGACCTGTTCGCAAGAAAACCAGTGGGCTGGGCCATGTCGTTCTCGCCGGACAGCAGGCTCACCATGAAAGCACTGGAA
ATGGCATGGGAAACCCGTGGTAAGCCCGTCGGGGTGATGTTCCACAGCGATCAAGGCAGCCATTATACGAGCAGGCAGTT
CCGGCAGTTACTGTGGCGATACCGGATCAGGCAGAGTATGAGTCGGCGTGGAAACTGCTGGGATAACAGCCCAATGGAGC
GCTTCTTCAGGAGTCTGAAGAACGAATGGGTGCCGGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACG
GACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCGCCAAACGAATCAGAAAACCG
ATACTGGAAAAACTCTAACGCGGTGGCCAGTTTTTGTTGA

Protein sequence :
MATLCHVFGVHRSSYKYWKNRPEKPDGRRAVLRSQVLELHGISHGSAGARSIATMATQRGYQMGRWLAGRLMKELGLVSC
QQPTHRYKRGGHEHVAIPNHLERQFAVTEPNQVWCGDVTYIWTGKRWAYLAVVLDLFARKPVGWAMSFSPDSRLTMKALE
MAWETRGKPVGVMFHSDQGSHYTSRQFRQLLWRYRIRQSMSRRGNCWDNSPMERFFRSLKNEWVPATGYVSFSDAAHAIT
DYIVGYYSALRPHEYNGGLPPNESENRYWKNSNAVASFC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
l7094 CAD33743.1 ORF B protein Not tested PAI I 536 Protein 5e-99 91
orfB CAE85178.1 OrfB protein, IS911 Not tested PAI V 536 Protein 5e-99 91
orfB ACX47958.1 IS1359 transposase; OrfB Not tested SGI1 Protein 8e-95 66
orfB YP_001217329.1 transposase OrfAB subunit B Not tested VPI-2 Protein 1e-94 66
VPI2_0008c ACA01825.1 transposase OrfAB subunit B Not tested VPI-2 Protein 8e-95 66
orfB AGK06910.1 IS1359 transposase; OrfB Not tested SGI1 Protein 8e-95 66
overlap with orfA characteristic of IS3 family members AGK06947.1 IS1359 transposase; OrfB Not tested SGI1 Protein 8e-95 66
orfB AGK06993.1 IS1359 transposase; OrfB Not tested SGI1 Protein 8e-95 66
orfB AGK07051.1 IS1359 transposase; OrfB Not tested SGI1 Protein 8e-95 66
VC1789 NP_231424.1 transposase OrfAB subunit B Not tested VPI-2 Protein 1e-94 66
unnamed AAC31485.1 L0006 Not tested LEE Protein 1e-66 65
ECs4537 NP_312564.1 hypothetical protein Not tested LEE Protein 1e-66 65
unnamed CAI43898.1 putative transposase Not tested LEE Protein 2e-67 64
aec65 AAW51748.1 Aec65 Not tested AGI-3 Protein 2e-67 64
ECO111_3779 YP_003236114.1 putative IS602 transposase OrfB Not tested LEE Protein 2e-70 64
Z5089 NP_290241.1 transposase Not tested LEE Protein 6e-68 63
unnamed ACU09432.1 IS911 transposase orfB Not tested LEE Protein 4e-68 63
RS04 AAP82949.1 putative transposase Not tested PAPI-2 Protein 8e-65 55
trp1329B CAB46576.1 IS1329 transposase B Not tested HPI Protein 3e-36 41
tnpB CAB61574.1 transposase B Not tested HPI Protein 4e-37 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECL_04209 YP_003614691.1 putative IS911 transposase orfA VFG1484 Protein 3e-99 91
ECL_04209 YP_003614691.1 putative IS911 transposase orfA VFG1122 Protein 4e-95 66
ECL_04209 YP_003614691.1 putative IS911 transposase orfA VFG0785 Protein 3e-68 63