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Name : ECL_00371 (ECL_00371) Accession : YP_003610886.1 Strain : Enterobacter cloacae ATCC 13047 Genome accession: NC_014121 Putative virulence/resistance : Virulence Product : Outer membrane usher protein PmfC Function : - COG functional category : N : Cell motility COG ID : COG3188 EC number : - Position : 387206 - 389623 bp Length : 2418 bp Strand : + Note : - DNA sequence : ATGTCAGTAAAATTAAAAACGAATCTTACAATTATTGCTCTCCTGGTGATGAATTGCTGCTATGCAGCAACGGCGCGCGG AGAAGAGCGCGTTGAGTTTAATACTGATGTTCTGGATGCTTCAGATCGTACCCGTATTGATCTGTCACGTTTTGCGACAG ATAACTATGTCACACCTGGTGATTATCTGCTGGATATCCGTATTAACGGCCAGTCGGTAGGCCAGGAGAAAATCCGTTAT GTGGAATCGCCTGAAGGCAATCGTACGCTGCCGTGTATCAGCGGCGACCTGCTGAACAAACTGGCGCTGAAAGAAGACGC ACGTTCACAGATCGCTCAAATCTATGAAAACTGCTATTCCCTGCAGCGTTTGTCGGGCGCGAAATTAAGCAACTATGCCG GCGTGCTTGATATCACCGTGCCGCAGGCATGGATGAAGTACAACGATCCTGACTGGACGCCGCCTGAACGTTGGGATGAA GGTATTGCTGGCCTGATTTTTGACTACAGCATTAACGGGCAGCTGACTCGTCAGTTCAGCGACAATAAAAACTACAGCGC GATATCAGGTTACGGTCAGGCGGGAGCTAACATCGGCGGCTGGCGCATACGCGGTGAATATCAGACCAGCTACTACAGCC AGCACCATCAATCCAGTTTTGACTGGAACCAGATCTACGCCTACCGGCCTTTGCCGATGATGGCGGCAAAACTGACGCTG GGGGAGATTTACCTGAATTCGCAGGTTTTCGATACGCTGCGATTTACCGGGATTAACCTCGCCAGCGATGAGCGGATGCT GCCGCCTGCGCTGCAGGGCTATGCGCCTGAAATCCACGGTATTGCTCGCTCGAATGCCAAAGTGACCGTCAGTCAGAGCG GGCGCGTCATCTATGAAACTACCGTCCCCGCCGGACCGTTCAATATTCAGGATTTGCGCAGTTCAGTGCGCGGTACGCTC GATGTACGCGTTGAGGAGCAGGATGGCTCGGTATCGCTGTTCCAGGTGAACACCGCCAGCATTCCGTATCTCACGCGTCC GGGCTATGTGCGTTACAACCTCTCTGGTGGCACGCCGTCCCGCTATAACCACTCGCTAAAGGGACCGACGTTCCTGTCTG GCGATTTCTCCTGGGGGATCAGCAATGCGTGGTCGCTGTACGGTGGCCTTCAGTCATCGGGTGAAGCCTACACTGCAGCC TCTCTGGGTATAGGTCGCGATCTGAACGCGTTAGGGGCGATCTCTCTGGATGCCACAGAGTCGTGGAGCCGTGAGCCTGA CGGCAAACGCCTGAAAGGTACCTCATATAAGTTGAGCTACGCAAAAACCTTCGACGAATACAACAGCTCAATCACGTTCG CGGGGTACCGCTTCTCACAGGAAGACTTCCGCACGATGGCGCAATACCTTGATGAGCGTTATCAGGGTTATGACCATGTC GGACGCGAGAAACAGCTCTACACCATTACCGGGAGTAAAACCTTCTGGGCCGGTGAGGCGGGTAAAGCGACGACCGTCTT TCTTACCTGGACCCACCAAAACTACTGGAATCAGCGCAGCCAGGATCGATACGGCATGTCCGTGGGGCGAGCCTTCCGCG TTGGCGATATCAACGGCATCACCGCCAATCTTTCTGCTTACCGTACCGATTATAAAGGGCGTAAGGACGACTCAATTTCC TTCTCGCTGTCTGTGCCGATTGGGGATAACAAATGGGCGGGTCTGGACGTCCAGACCAACAACGGTAAAACCAGTCCAAT GGCGTCATACACCGACAACAGCGACTTCAACAATCTGTGGCGCGTTCGCGCGGGTGCCAGTCAGAACAGTAACGCCAGCG TTGACGGCTATTACCTGCACCGTTCGCAGTGGGCGGAAATTAATACCAACGCAAGCTACCAGCAAAATGAGTTTATGGCG TTAAGCACCACTCTGCGCGGCGGCTTTACGGCGACCCGGCACGGTGCGGCGATGCATAACAGTGGCGCAACAATGAACAC GGCGCGGGTCATGGTCGATACCAACGGCATTGGCGGCGTCCCACTCAATGGTGAAAAGTCCCGGACTAACCGCTTCGGTA TTGCCGTTGTACCGGATGTAGTGAGTTACAACAGCTTTGATACCCGCGTAGACGTCGACGCCATGGATGGCGATATCGAA CCGGCCAGAGCCATCAGTACCAGCACCCTCACTGAAGGGGCCATCGGCTATCAGGCTTTTGGGATGGCGAAAGGGATGAA AATGATGGGCACGTTGCGCCTCGTTGATAACAGCGTCCCTCCTTTTGGGGCAGAAATTTACAACGCCGATGGCGTAAGCG TCGCCATGGTGCTGGAGGACGGAAAGGCATGGCTTGCGGGCATAAACGCCAATGAAACCCTGAATGTTATGTGGGGGGTA AACAGCAGTGCAAAGTAA Protein sequence : MSVKLKTNLTIIALLVMNCCYAATARGEERVEFNTDVLDASDRTRIDLSRFATDNYVTPGDYLLDIRINGQSVGQEKIRY VESPEGNRTLPCISGDLLNKLALKEDARSQIAQIYENCYSLQRLSGAKLSNYAGVLDITVPQAWMKYNDPDWTPPERWDE GIAGLIFDYSINGQLTRQFSDNKNYSAISGYGQAGANIGGWRIRGEYQTSYYSQHHQSSFDWNQIYAYRPLPMMAAKLTL GEIYLNSQVFDTLRFTGINLASDERMLPPALQGYAPEIHGIARSNAKVTVSQSGRVIYETTVPAGPFNIQDLRSSVRGTL DVRVEEQDGSVSLFQVNTASIPYLTRPGYVRYNLSGGTPSRYNHSLKGPTFLSGDFSWGISNAWSLYGGLQSSGEAYTAA SLGIGRDLNALGAISLDATESWSREPDGKRLKGTSYKLSYAKTFDEYNSSITFAGYRFSQEDFRTMAQYLDERYQGYDHV GREKQLYTITGSKTFWAGEAGKATTVFLTWTHQNYWNQRSQDRYGMSVGRAFRVGDINGITANLSAYRTDYKGRKDDSIS FSLSVPIGDNKWAGLDVQTNNGKTSPMASYTDNSDFNNLWRVRAGASQNSNASVDGYYLHRSQWAEINTNASYQQNEFMA LSTTLRGGFTATRHGAAMHNSGATMNTARVMVDTNGIGGVPLNGEKSRTNRFGIAVVPDVVSYNSFDTRVDVDAMDGDIE PARAISTSTLTEGAIGYQAFGMAKGMKMMGTLRLVDNSVPPFGAEIYNADGVSVAMVLEDGKAWLAGINANETLNVMWGV NSSAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pixC | CAE85159.1 | PixC protein | Not tested | PAI V 536 | Protein | 1e-145 | 44 |
| prfC | CAD42029.1 | PrfC protein | Virulence | PAI II 536 | Protein | 2e-141 | 42 |
| papC | YP_854254.1 | outer membrane usher protein PapC | Virulence | PAI I APEC-O1 | Protein | 2e-140 | 42 |
| papC | AAZ04424.1 | outer membrane usher protein | Virulence | PAI I APEC-O1 | Protein | 2e-140 | 42 |
| papC | NP_755465.1 | PapC protein | Virulence | PAI I CFT073 | Protein | 5e-141 | 42 |
| papC_2 | NP_757034.1 | PapC protein | Virulence | PAI II CFT073 | Protein | 6e-141 | 42 |
| papC | YP_002414015.1 | Outer membrane usher protein PapC | Not tested | Not named | Protein | 3e-141 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ECL_00371 | YP_003610886.1 | Outer membrane usher protein PmfC | VFG1548 | Protein | 1e-141 | 42 |
| ECL_00371 | YP_003610886.1 | Outer membrane usher protein PmfC | VFG0884 | Protein | 2e-141 | 42 |
| ECL_00371 | YP_003610886.1 | Outer membrane usher protein PmfC | VFG0895 | Protein | 3e-141 | 42 |
