Gene Information

Name : ECL_03688 (ECL_03688)
Accession : YP_003614171.1
Strain : Enterobacter cloacae ATCC 13047
Genome accession: NC_014121
Putative virulence/resistance : Unknown
Product : putative integrase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0582
EC number : -
Position : 3766578 - 3767777 bp
Length : 1200 bp
Strand : +
Note : -

DNA sequence :
ATGCCACTGAATGCTCGTCAGGTCGAGACTGCAAAGCCCAGAGATAAAGCCTATAAACTCGCTGATGGCGGAGGGCTCTA
TCTCATGGTCAATACTAACGGTTCAAAGTACTGGCGAATGAAGTATCGATTTGCCGGTAAAGAGAAAAAACTCTCGTTCG
GAACCTATCCTGACATCTCACTTGCGGAAGCCCGCACTAAGCGCGATGAAGCGAGAAAAACATTGGCAAATGATAAAGAT
CCCGGTGAAGTTAAAAAAGCCGAACTACTTGCCCAAAAACTATCGGTTACGAATACTTTTGAAGCGATAGCGGTTGAGTG
GTACAACGCAAAAGTTTCTGGCTGGTCAAAAAACTACGCTGACTATGTTAACCGGGCCTTCAAAAACAATGTATTTCCCT
TTGTTGGATCGCAGCCGGTTAATGAGATAAAGCCACTGGAGCTTCTGTCTGTATTGCAGCGTATGGAAAAGCGAGGTGCG
CCGGAGCTTGCCAGTAAAGTGCGCCAACGTTGTAGCGAAGTGTTCCGTTACGCTATTGTTACTGGCCGAGCCGAGTACAA
CCCTGCGGCTGATCTTGGTAGTGCTTTACAGGGGTACGAGAAACAACATTATCCCTTTCTTACTGCTGCTGAGCTACCCG
AGTTTTTACAAAAGCTTTCACAATACACCGGCAGTCTAGTAACGCTTCTGGCGACCCGACTACTCATGCTTACGGGCTTA
CGAACCGTCGAATTACGTATGGCAGAATGGAGTGAAATCGACTTCGAAAACCATATCTGGGAAATACCGAAAAGTAGAAT
GAAGATGAGGCGACCCCACATAGTGCCCCTTTCTGCTCAATCCTTAGCAGCACTTCGGCAACTAAAGCAATTGACCGGTA
CTTACCAGTTTATCTTTGCAGGTCGAAACGATGTTAATAAACCAATGAGCGAAGCCAGCATCAATATGGTTATTAAAAGG
ATTGGTTACGATAAGAGAGCAACCGGACATGGTTTTCGTCACACCATGAGCACAATCTTGCATGAGGAAGGATTCAACAC
TGCTTGGATTGAGACCCAGCTCGCGCATGTGGACAAGAACGCGATTCGCGGGACCTATAACCATGCGCAGTATCTTGAAG
GGAGGAAAGAGATGATGCAGTGGTATGGGGACTATTTGGATGGATTGCGATTGGATGGAAACGTTGCCAGAGTTAGTTAA

Protein sequence :
MPLNARQVETAKPRDKAYKLADGGGLYLMVNTNGSKYWRMKYRFAGKEKKLSFGTYPDISLAEARTKRDEARKTLANDKD
PGEVKKAELLAQKLSVTNTFEAIAVEWYNAKVSGWSKNYADYVNRAFKNNVFPFVGSQPVNEIKPLELLSVLQRMEKRGA
PELASKVRQRCSEVFRYAIVTGRAEYNPAADLGSALQGYEKQHYPFLTAAELPEFLQKLSQYTGSLVTLLATRLLMLTGL
RTVELRMAEWSEIDFENHIWEIPKSRMKMRRPHIVPLSAQSLAALRQLKQLTGTYQFIFAGRNDVNKPMSEASINMVIKR
IGYDKRATGHGFRHTMSTILHEEGFNTAWIETQLAHVDKNAIRGTYNHAQYLEGRKEMMQWYGDYLDGLRLDGNVARVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_03025 YP_001439090.1 hypothetical protein Not tested Not named Protein 1e-116 66
int CAC39282.1 integrase Not tested LPA Protein 1e-116 64
unnamed AFX83955.1 integrase Not tested SE-PAI Protein 3e-116 64
aec33 AAW51716.1 Int Not tested AGI-3 Protein 2e-116 64
S4835 NP_839238.1 integrase Not tested SHI-2 Protein 8e-115 64
SF3698 NP_709437.1 integrase Not tested SHI-2 Protein 8e-115 64
int AAD54663.1 Sai integrase Not tested SHI-2 Protein 6e-115 64
int AAC31482.1 CP4-like integrase Not tested LEE Protein 1e-116 63
int ACU09430.1 integrase Not tested LEE Protein 1e-116 63
intL NP_290239.1 integrase for prophage 933L and the LEE pathogenicity island Not tested LEE Protein 2e-116 63
ECs4534 NP_312561.1 integrase Not tested LEE Protein 2e-116 63
int AAD44730.1 Int Not tested SHI-2 Protein 7e-115 63
SESS1296_03598 AFO66301.1 bacteriophage integrase Not tested SESS LEE Protein 6e-70 43
SESS1635_03816 AFO66367.1 bacteriophage integrase Not tested SESS LEE Protein 6e-70 43
S4822 NP_838459.1 P4-type integrase Not tested SHI-1 Protein 1e-67 42
SF2964 NP_708738.1 P4-type integrase Not tested SHI-1 Protein 1e-67 42
APECO1_3534 YP_854214.1 P4-like integrase Not tested PAI I APEC-O1 Protein 6e-68 42
c5216 NP_757064.1 prophage P4 integrase Not tested PAI II CFT073 Protein 3e-68 42
ORF_1 AAZ04412.1 phage integrase Not tested PAI I APEC-O1 Protein 5e-68 42
intB CAD42017.1 bacteriophage P4 integrase Not tested PAI II 536 Protein 2e-65 42
Z4313 NP_289539.1 pathogenicity island integrase Not tested OI-122 Protein 3e-67 42
int AAL51028.1 CP4-like integrase Not tested LEE Protein 4e-68 42
int-phe AAL60261.1 Int-phe Not tested LEE Protein 4e-68 42
int AAK16198.1 Int Not tested PAI-I AL862 Protein 6e-68 42
int ADD91747.1 P4 integrase Not tested PAI-I AL862 Protein 6e-68 42
ECO103_3550 YP_003223418.1 integrase Not tested LEE Protein 6e-68 42
int AAT48697.1 CP4-like integrase Not tested PAI I 4787 Protein 6e-68 42
ECO26_5300 YP_003232178.1 integrase Not tested LEE Protein 6e-68 42
int AAL51003.1 CP4-like integrase Not tested LEE Protein 5e-68 42
c3556 NP_755431.1 prophage P4 integrase Not tested PAI I CFT073 Protein 3e-68 42
ECUMN_3322 YP_002414004.1 integrase Not tested Not named Protein 7e-67 42
int-phe AAL57571.1 CP4-like integrase Not tested LEE Protein 4e-68 42
STY4821 NP_458899.1 integrase Not tested SPI-10 Protein 2e-64 42
intA AAB00935.1 integrase A Not tested vap locus Protein 3e-53 41
int AAK00456.1 Int Not tested SHI-1 Protein 4e-60 41
ECO111_3718 YP_003236059.1 putative integrase Not tested LEE Protein 1e-65 41
intP4 CAE85151.1 CP4 integrase protein Not tested PAI V 536 Protein 1e-67 41
int CAC81896.1 integrase Not tested LEE II Protein 2e-60 41
int NP_458759.1 bacteriophage integrase Not tested SPI-7 Protein 1e-62 41
int NP_807963.1 bacteriophage integrase Not tested SPI-7 Protein 1e-62 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECL_03688 YP_003614171.1 putative integrase VFG0598 Protein 4e-115 64
ECL_03688 YP_003614171.1 putative integrase VFG0783 Protein 8e-117 63
ECL_03688 YP_003614171.1 putative integrase VFG0626 Protein 6e-68 42
ECL_03688 YP_003614171.1 putative integrase VFG1536 Protein 1e-65 42
ECL_03688 YP_003614171.1 putative integrase VFG1693 Protein 1e-68 42