Gene Information

Name : ECL_03606 (ECL_03606)
Accession : YP_003614089.1
Strain : Enterobacter cloacae ATCC 13047
Genome accession: NC_014121
Putative virulence/resistance : Unknown
Product : integrase family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0582
EC number : -
Position : 3681244 - 3682485 bp
Length : 1242 bp
Strand : -
Note : -

DNA sequence :
ATGGATAAAAACCGGATAACCTACCGGACAAATTTCTCACCTTGTCCTGTTGCCATGCCATTAACCGACACAAAAATCAG
AAATGCAAAACCTCAGGAGAGGCCTTACTCGCTTCAGGATGGGCAGGGTCTCTATCTTGATGTCAGGCCTACCGGTGCAA
AGATATGGCGATACCGGTTCTGGATTACACCAAAAAAAGACGGTCGCTACACGATTGGAGAGTACCCTGGAGTTTCCCTT
GCTGATGCACGAAGAGAAAGAGAGTGGGCTCGTGAGCAGGTGAAGCAGGGAAAGAATCCGACCATTGTCAAAGATACTGA
GAAGCTGATGGTGATGGGTGACGCTGAGAACACCTTCAAATCCATCGCTGAAGAATGGTATGAGCGCAAGTGTCAGACGT
GGGCAGAGAAGACGCAGATAGTTAACCGCGGGTTCCTTGACAAGCACATCCTGCCGTCCATTGGAAAGATACCAGTTAAG
GACATTAAGGCAGCGCACATACTCGCCTTAATGCTCTCACTGGAGAAAGCTGGTAACGCCTATTCTGCCGGAAAGGTGAG
ACAGATATGTTCGGCTGTATTTTGCTATGCGGTAGCTACGCTGAGAGCGGAAGTTGATCCTTCTTATGCGCTACGGGGGG
CAGTGATGCAGAAGCCTACAACGCACGCCAGGCCAGCGACAACAGGAGAGTTGCGTCAGCTATTCGTTGCGCTACGTAAT
TATAAAAGCCCCGTTATGGTCATCTGCATAAAAATGCTGGTTATGACATTCGTGCGTCAACAGGAGCTTAGGTTTGCCAG
GTGGGAAGATATCAGCTTTGAAAAGGCTGAATGGATAATCCCGAAAGAGGTGATGAAGAAACGCCGCGAACATCGCGTTC
CGTTGTGTGAGCATGTTATCTCATTGCTTGAGGAACTTAAACCTCTGACCGGTGATAAAGAATATCTCTTCCCCAGCCCA
TCGAAGGCTGGACAGCCTATTGCCAAAACCACTATTAACCGTGCTATCGAGTATCAGGGATTTGCAAGCGGTGAGATCAC
CGGACATGACTTCCGTGCCACGGCATCCACCGCTTTATATGAGCAAGGCTTCAGGCCAGAAGTGATAGAGGCACAACTGG
CGCATCAGCAAAAGAATAGAGTCGCTGCCGCGTATAACCATGCGGAGTATATGAAAGAGAGAAGGGAAATGATGGAATGG
TGGGGCGGTGTTATTGCTGACCTGATCGCGGACAAGAAGTGA

Protein sequence :
MDKNRITYRTNFSPCPVAMPLTDTKIRNAKPQERPYSLQDGQGLYLDVRPTGAKIWRYRFWITPKKDGRYTIGEYPGVSL
ADARREREWAREQVKQGKNPTIVKDTEKLMVMGDAENTFKSIAEEWYERKCQTWAEKTQIVNRGFLDKHILPSIGKIPVK
DIKAAHILALMLSLEKAGNAYSAGKVRQICSAVFCYAVATLRAEVDPSYALRGAVMQKPTTHARPATTGELRQLFVALRN
YKSPVMVICIKMLVMTFVRQQELRFARWEDISFEKAEWIIPKEVMKKRREHRVPLCEHVISLLEELKPLTGDKEYLFPSP
SKAGQPIAKTTINRAIEYQGFASGEITGHDFRATASTALYEQGFRPEVIEAQLAHQQKNRVAAAYNHAEYMKERREMMEW
WGGVIADLIADKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
int AAD44730.1 Int Not tested SHI-2 Protein 1e-66 42
int AAC31482.1 CP4-like integrase Not tested LEE Protein 2e-67 41
int ACU09430.1 integrase Not tested LEE Protein 2e-67 41
intL NP_290239.1 integrase for prophage 933L and the LEE pathogenicity island Not tested LEE Protein 3e-67 41
ECs4534 NP_312561.1 integrase Not tested LEE Protein 3e-67 41
int CAC39282.1 integrase Not tested LPA Protein 5e-67 41
aec33 AAW51716.1 Int Not tested AGI-3 Protein 3e-67 41
S4835 NP_839238.1 integrase Not tested SHI-2 Protein 4e-65 41
SF3698 NP_709437.1 integrase Not tested SHI-2 Protein 4e-65 41
int AAD54663.1 Sai integrase Not tested SHI-2 Protein 3e-65 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECL_03606 YP_003614089.1 integrase family protein VFG0783 Protein 1e-67 41
ECL_03606 YP_003614089.1 integrase family protein VFG0598 Protein 2e-65 41