Gene Information

Name : ECL_03539 (ECL_03539)
Accession : YP_003614022.1
Strain : Enterobacter cloacae ATCC 13047
Genome accession: NC_014121
Putative virulence/resistance : Virulence
Product : two-component system, OmpR family, response regulator TctD
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3632171 - 3632845 bp
Length : 675 bp
Strand : -
Note : -

DNA sequence : 
ATGCGTCTCTTACTGGCGGAAGATAATCGTGAGCTGGCTCACTGGCTGGAGAAAGCGCTGGTGCAGGAGGGCTTTGCCGT
AGACTGCGTTTCTGACGGGCGCGCGGCCGATCATCTGCTGCAGGGGGAAAACTACGCGGTAGCGATACTGGACATCGGTA
TGCCCGGTTTTGACGGCCTGGAGGTGGTGCACCGTTTACGTAAACGCGGCCAGACCTTGCCGGTGCTGTTTCTCACCGCA
CGCAGCAACGTGGCGGATCGGGTGAAAGGCCTGAACGCCGGGGCGGATGATTATCTGCCAAAACCGTTTGAGCTGGAGGA
GCTGGACGCCAGGCTTCGCGCCCTGCTGCGCAGAAGCGAGGGGAGAACCCAGGAACGCCAGCGCCTTGGGGAGCTGGAGT
ATGACGACGACGGTTTTTTCCTGCTGCGCGACGAGCCGCTCTCGCTCACCCCGCGCGAACTGTCGCTGCTGAAGGTGCTG
ATGCATCGTCGCACCCGCCCCGTTTCCCGGCAGCAGTTGTTCGATCAGGTGTTTAGCCTGAACGACGACGTCAGCCCGGA
GAGTCTCGATCTTTACATTCATCGCCTGCGCAAAAAGCTGAGCGGCAGCGGCGTGCGGATCACCACCCTGCGCGGACTGG
GCTATGTGCTGGAGTGCGGCGATGAAGTGGGTTAA

Protein sequence : 
MRLLLAEDNRELAHWLEKALVQEGFAVDCVSDGRAADHLLQGENYAVAILDIGMPGFDGLEVVHRLRKRGQTLPVLFLTA
RSNVADRVKGLNAGADDYLPKPFELEELDARLRALLRRSEGRTQERQRLGELEYDDDGFFLLRDEPLSLTPRELSLLKVL
MHRRTRPVSRQQLFDQVFSLNDDVSPESLDLYIHRLRKKLSGSGVRITTLRGLGYVLECGDEVG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-24 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECL_03539 YP_003614022.1 two-component system, OmpR family, response regulator TctD BAC0487 Protein 2e-31 44
ECL_03539 YP_003614022.1 two-component system, OmpR family, response regulator TctD BAC0125 Protein 9e-29 43
ECL_03539 YP_003614022.1 two-component system, OmpR family, response regulator TctD BAC0197 Protein 2e-25 42
ECL_03539 YP_003614022.1 two-component system, OmpR family, response regulator TctD BAC0083 Protein 3e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECL_03539 YP_003614022.1 two-component system, OmpR family, response regulator TctD VFG0473 Protein 2e-30 44