Gene Information

Name : ECL_00320 (ECL_00320)
Accession : YP_003610835.1
Strain : Enterobacter cloacae ATCC 13047
Genome accession: NC_014121
Putative virulence/resistance : Resistance
Product : DNA-binding transcriptional regulator SoxS
Function : -
COG functional category : K : Transcription
COG ID : COG2207
EC number : -
Position : 330684 - 331010 bp
Length : 327 bp
Strand : -
Note : -

DNA sequence : 
ATGTCGCATCAGCAAATTATTCAGACACTTATTGAATGGATTGATGAACATATCGACCAACCGTTGAACATTGATGTGGT
CGCGAAAAAGTCGGGCTATTCGAAATGGTATTTACAGAGAATGTTCCGGACCGTAATGCACCAGACGCTGGGTGAGTACA
TTCGTCAGCGCAGGTTACTGCTGGCAGCGCAGGCGTTACGCTCTACGCAGCGGCCTATTTTTGATATCGCGATGGATCTG
GGGTATGTGTCGCAACAAACCTTTTCCCGCGTGTTTCGCCGCGAGTTTGACCGCACGCCAAGCGATTACCGTCACCAGTT
GAATTAA

Protein sequence : 
MSHQQIIQTLIEWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVMHQTLGEYIRQRRLLLAAQALRSTQRPIFDIAMDL
GYVSQQTFSRVFRREFDRTPSDYRHQLN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
soxS YP_219131.1 DNA-binding transcriptional regulator SoxS Not tested SPI-4 Protein 5e-38 95
tetD AAL08447.1 putative transcriptional regulator TetD Not tested SRL Protein 1e-15 47
tetD AEA34665.1 tetracycline resistance protein D Not tested Not named Protein 1e-15 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECL_00320 YP_003610835.1 DNA-binding transcriptional regulator SoxS CP001918.1.gene327.p Protein 4e-40 100
ECL_00320 YP_003610835.1 DNA-binding transcriptional regulator SoxS CP001138.1.gene4488. Protein 2e-38 95
ECL_00320 YP_003610835.1 DNA-binding transcriptional regulator SoxS CP000647.1.gene4499. Protein 5e-39 93
ECL_00320 YP_003610835.1 DNA-binding transcriptional regulator SoxS NC_002695.1.914293.p Protein 2e-37 90
ECL_00320 YP_003610835.1 DNA-binding transcriptional regulator SoxS BAC0371 Protein 2e-37 90
ECL_00320 YP_003610835.1 DNA-binding transcriptional regulator SoxS CP000034.1.gene4505. Protein 4e-37 89
ECL_00320 YP_003610835.1 DNA-binding transcriptional regulator SoxS CP001138.1.gene612.p Protein 1e-19 49
ECL_00320 YP_003610835.1 DNA-binding transcriptional regulator SoxS NC_010558.1.6276025. Protein 7e-16 47
ECL_00320 YP_003610835.1 DNA-binding transcriptional regulator SoxS CP000647.1.gene1624. Protein 5e-16 43
ECL_00320 YP_003610835.1 DNA-binding transcriptional regulator SoxS CP001918.1.gene2033. Protein 2e-16 43
ECL_00320 YP_003610835.1 DNA-binding transcriptional regulator SoxS BAC0560 Protein 2e-16 42
ECL_00320 YP_003610835.1 DNA-binding transcriptional regulator SoxS NC_002695.1.917339.p Protein 2e-16 42
ECL_00320 YP_003610835.1 DNA-binding transcriptional regulator SoxS CP001138.1.gene1637. Protein 2e-16 42
ECL_00320 YP_003610835.1 DNA-binding transcriptional regulator SoxS CP000034.1.gene1596. Protein 2e-16 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECL_00320 YP_003610835.1 DNA-binding transcriptional regulator SoxS VFG0585 Protein 1e-38 95
ECL_00320 YP_003610835.1 DNA-binding transcriptional regulator SoxS VFG1038 Protein 6e-16 47